No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv817539 |
chr15:54132584-55095235 |
Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1038660 |
chr15:54756184-55039913 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv569509 |
chr15:54888537-54932716 |
Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
4 |
nsv569518 |
chr15:54898631-54954864 |
Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNAmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv1043600 |
chr15:54910593-55010156 |
Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive regionmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
6 |
nsv1043237 |
chr15:54916301-55034633 |
Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS
|
Chromatin interactive regionmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
7 |
nsv904238 |
chr15:54919539-54998764 |
Enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats
|
Chromatin interactive regionmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
8 |
nsv1053983 |
chr15:54920850-54999183 |
Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
9 |
nsv833013 |
chr15:54927825-55135274 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|