The 2.0 version of rSNPBase

Variant report

Variant rs7690165
Chromosome Location chr4:87752909-87752910
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87731200-87756000 Weak transcription Pancreas Pancrea
2 chr4:87732400-87760000 Weak transcription Psoas Muscle Psoas
3 chr4:87737800-87754800 Weak transcription Brain Hippocampus Middle brain
4 chr4:87739800-87757600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr4:87740200-87755200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr4:87743200-87769400 Weak transcription Right Ventricle heart
7 chr4:87745400-87757400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr4:87751200-87753600 Strong transcription Left Ventricle heart
9 chr4:87751200-87754400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr4:87751600-87753000 Enhancers Ovary ovary
11 chr4:87751600-87753400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr4:87751600-87753400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr4:87751600-87753600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr4:87751600-87753800 Enhancers NHLF lung
15 chr4:87752000-87753200 Enhancers HSMMtube muscle
16 chr4:87752000-87753200 Enhancers NH-A brain
17 chr4:87752200-87753000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:87752200-87753000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr4:87752200-87753000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr4:87752200-87753000 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr4:87752200-87753000 Enhancers Stomach Mucosa stomach
22 chr4:87752200-87753200 Enhancers Fetal Lung lung
23 chr4:87752200-87753200 Enhancers HSMM muscle
24 chr4:87752400-87753000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
25 chr4:87752400-87753000 Enhancers Placenta Placenta
26 chr4:87752400-87753000 Enhancers Lung lung
27 chr4:87752400-87753000 Flanking Active TSS Osteobl bone
28 chr4:87752400-87753200 Flanking Active TSS Hela-S3 cervix
29 chr4:87752600-87753000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr4:87752600-87753000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr4:87752600-87753000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr4:87752600-87753000 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr4:87752600-87753000 Enhancers Esophagus oesophagus
34 chr4:87752600-87753200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr4:87752600-87753200 Transcr. at gene 5' and 3' NHEK skin
36 chr4:87752600-87753800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr4:87752600-87754000 Enhancers HMEC breast
38 chr4:87752600-87764400 Weak transcription Adipose Nuclei Adipose
39 chr4:87752800-87753200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr4:87752800-87753200 Enhancers NHDF-Ad bronchial
41 chr4:87752800-87755800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr4:87752800-87756200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015