Variant report

Variant	rs7691847
Chromosome Location	chr4:76761164-76761165
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10024226	0.80[ASN][1000 genomes]
rs11932991	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs13139405	0.87[AFR][1000 genomes]
rs1876098	0.91[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs2047981	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4532262	0.81[AMR][1000 genomes]
rs6815705	0.83[AFR][1000 genomes]
rs6831235	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353539	chr4:76530136-76993859	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
2	nsv529613	chr4:76654941-77081576	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7691847	ASAHL	cis	multi-tissue	Pritchard

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:76736600-76763200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr4:76743800-76764800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:76753400-76762600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr4:76754200-76762600	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr4:76756400-76764800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr4:76758600-76762400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:76758800-76762800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr4:76760400-76761200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:76760800-76762600	Weak transcription	K562	blood
10	chr4:76761000-76762400	Weak transcription	A549	lung
11	chr4:76761000-76762400	Weak transcription	HepG2	liver
12	chr4:76761000-76762600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr4:76761000-76762800	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr4:76761000-76763200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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