Variant report

Variant	rs76940758
Chromosome Location	chr10:95767459-95767460
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:95755786..95758462-chr10:95765831..95768542,2	MCF-7	breast:
2	chr10:95766403..95768434-chr10:95786118..95787753,2	MCF-7	breast:
3	chr10:95767452..95769143-chr10:95770198..95772913,2	MCF-7	breast:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350805	chr10:95767273-95767504	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95760800-95768400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr10:95761800-95771600	Weak transcription	Right Atrium	heart
3	chr10:95764200-95768200	Enhancers	Fetal Intestine Small	intestine
4	chr10:95764200-95768400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr10:95764400-95768400	Enhancers	Fetal Intestine Large	intestine
6	chr10:95764400-95768800	Enhancers	Duodenum Mucosa	Duodenum
7	chr10:95764800-95769000	Enhancers	Stomach Mucosa	stomach
8	chr10:95765200-95767800	Enhancers	HSMMtube	muscle
9	chr10:95765600-95768400	Weak transcription	Gastric	stomach
10	chr10:95766000-95768000	Enhancers	Fetal Lung	lung
11	chr10:95766000-95768000	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr10:95766200-95767800	Enhancers	Adipose Nuclei	Adipose
13	chr10:95766400-95767600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr10:95766400-95767600	Enhancers	Skeletal Muscle Male	skeletal muscle
15	chr10:95766400-95767800	Enhancers	Fetal Muscle Leg	muscle
16	chr10:95766400-95767800	Enhancers	Ovary	ovary
17	chr10:95766400-95767800	Enhancers	Psoas Muscle	Psoas
18	chr10:95766600-95768000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr10:95766800-95767800	Weak transcription	Colonic Mucosa	Colon
20	chr10:95766800-95768400	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr10:95766800-95776600	Weak transcription	Small Intestine	intestine
22	chr10:95767000-95767600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr10:95767000-95767600	Enhancers	Osteobl	bone
24	chr10:95767000-95767800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr10:95767000-95768400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr10:95767000-95768400	Weak transcription	Rectal Smooth Muscle	rectum
27	chr10:95767000-95768600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr10:95767000-95768800	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr10:95767000-95776800	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr10:95767200-95767600	Weak transcription	Pancreas	Pancrea
31	chr10:95767200-95767800	Enhancers	HSMM	muscle
32	chr10:95767400-95767600	Flanking Active TSS	A549	lung
33	chr10:95767400-95767800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr10:95767400-95768400	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr10:95767400-95776800	Weak transcription	Muscle Satellite Cultured Cells	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links