Variant report

Variant	rs7694205
Chromosome Location	chr4:91461106-91461107
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10021478	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10027240	0.94[ASN][1000 genomes]
rs10030564	0.99[ASN][1000 genomes]
rs10032834	0.96[ASN][1000 genomes]
rs11724054	0.80[ASN][1000 genomes]
rs11727913	0.94[ASN][1000 genomes]
rs11943760	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17017106	0.96[ASN][1000 genomes]
rs17017142	0.95[ASN][1000 genomes]
rs17017145	0.95[ASN][1000 genomes]
rs2036152	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2036153	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56013711	0.96[ASN][1000 genomes]
rs6532233	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6828345	0.94[ASN][1000 genomes]
rs6828402	0.94[ASN][1000 genomes]
rs6849123	0.96[ASN][1000 genomes]
rs6855755	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6858175	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72885079	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7673757	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9991640	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931074	chr4:90970476-91753697	Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv999065	chr4:91049593-91520073	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv1830936	chr4:91287204-91546380	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv534470	chr4:91342219-91842807	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv879543	chr4:91428124-91524285	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv879544	chr4:91453933-91490418	Flanking Active TSS Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:91457800-91461200	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr4:91459200-91463400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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