Variant report

Variant	rs7696958
Chromosome Location	chr4:26497441-26497442
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs2854031	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs2854037	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs2968718	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3020588	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3020591	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3109845	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3111710	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3111712	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3113011	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs3113013	0.97[AFR][1000 genomes];0.88[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26492000-26504200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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