Variant report

Variant	rs7704175
Chromosome Location	chr5:50523961-50523962
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10471516	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10939906	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1501983	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6870975	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6871104	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7716272	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7721490	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7721930	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9291726	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:50521400-50524400	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr5:50522400-50524000	Weak transcription	Stomach Mucosa	stomach
3	chr5:50522400-50524400	Enhancers	Hela-S3	cervix
4	chr5:50523400-50524200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr5:50523600-50524000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr5:50523600-50524000	Enhancers	Fetal Heart	heart
7	chr5:50523600-50524200	Enhancers	H1 Cell Line	embryonic stem cell
8	chr5:50523600-50524400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr5:50523800-50524000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr5:50523800-50524200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr5:50523800-50524200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr5:50523800-50524200	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr5:50523800-50524200	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr5:50523800-50524200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr5:50523800-50524200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr5:50523800-50524400	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr5:50523800-50524400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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