Variant report

Variant	rs7707762
Chromosome Location	chr5:75788222-75788223
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10045331	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022032	chr5:75785106-75914003	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:59 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:75769600-75816600	Weak transcription	Primary B cells from cord blood	blood
2	chr5:75776200-75801000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr5:75776400-75791200	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:75776400-75800200	Weak transcription	Primary T cells from cord blood	blood
5	chr5:75776800-75791000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr5:75778400-75793200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr5:75780800-75793400	Weak transcription	Small Intestine	intestine
8	chr5:75783800-75788800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr5:75784000-75788800	Weak transcription	K562	blood
10	chr5:75784000-75791600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr5:75784200-75789200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
12	chr5:75784400-75789400	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr5:75784400-75789800	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr5:75784600-75788600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr5:75785800-75789800	Enhancers	Stomach Mucosa	stomach
16	chr5:75786000-75789000	Enhancers	Duodenum Mucosa	Duodenum
17	chr5:75786000-75790800	Enhancers	HepG2	liver
18	chr5:75786200-75788800	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr5:75786200-75789400	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr5:75786200-75789400	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr5:75786400-75789000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr5:75786400-75790800	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr5:75786400-75819800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr5:75786600-75789600	Enhancers	Liver	Liver
25	chr5:75786800-75789200	Weak transcription	Fetal Intestine Small	intestine
26	chr5:75786800-75790200	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr5:75786800-75793600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
28	chr5:75786800-75793600	Weak transcription	Fetal Lung	lung
29	chr5:75787000-75790400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr5:75787000-75793400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr5:75787200-75789200	Enhancers	H1 Cell Line	embryonic stem cell
32	chr5:75787200-75791600	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr5:75787400-75789400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
34	chr5:75787400-75789400	Enhancers	Placenta	Placenta
35	chr5:75787400-75789400	Enhancers	Pancreas	Pancrea
36	chr5:75787400-75792400	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr5:75787600-75788400	Strong transcription	Primary monocytes fromperipheralblood	blood
38	chr5:75787600-75788400	Genic enhancers	Primary hematopoietic stem cells	blood
39	chr5:75787600-75788400	Enhancers	Colonic Mucosa	Colon
40	chr5:75787600-75789000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
41	chr5:75787600-75789400	Enhancers	H9 Cell Line	embryonic stem cell
42	chr5:75787600-75789400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr5:75787600-75789400	Enhancers	Gastric	stomach
44	chr5:75787800-75788800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr5:75787800-75789000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
46	chr5:75787800-75789000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr5:75787800-75789200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr5:75787800-75789400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr5:75787800-75789400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
50	chr5:75787800-75790000	Enhancers	Primary T helper cells PMA-I stimulated	--

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