Variant report

Variant	rs77080517
Chromosome Location	chr9:93846525-93846526
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052912	chr9:93846078-93866362	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	esv2623115	chr9:93846525-93846525	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2396550	chr9:93846525-93846526	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:93841000-93847800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr9:93841200-93847800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:93841600-93849600	Weak transcription	Fetal Intestine Small	intestine
4	chr9:93843000-93849000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr9:93846200-93846600	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr9:93846200-93846800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr9:93846200-93846800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr9:93846200-93846800	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr9:93846200-93846800	Enhancers	HepG2	liver
10	chr9:93846400-93846600	Enhancers	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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