Variant report

Variant	rs77147853
Chromosome Location	chr4:86740024-86740025
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3450999	chr4:86485840-86773745	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
2	nsv879518	chr4:86739805-86778943	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86728200-86747200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr4:86729000-86744600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr4:86729400-86747400	Weak transcription	Colon Smooth Muscle	Colon
4	chr4:86729800-86743600	Weak transcription	HSMMtube	muscle
5	chr4:86729800-86744600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:86730200-86741400	Weak transcription	HSMM	muscle
7	chr4:86734400-86741000	Weak transcription	Primary B cells from peripheral blood	blood
8	chr4:86734600-86741200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:86734600-86741200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr4:86734600-86743000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr4:86734600-86743200	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr4:86734600-86743400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr4:86734600-86743400	Weak transcription	Aorta	Aorta
14	chr4:86734600-86743400	Weak transcription	Osteobl	bone
15	chr4:86736200-86748600	Weak transcription	Fetal Muscle Trunk	muscle
16	chr4:86737000-86740600	Weak transcription	HUVEC	blood vessel
17	chr4:86737400-86741200	Weak transcription	Fetal Muscle Leg	muscle
18	chr4:86737600-86744600	Weak transcription	K562	blood
19	chr4:86737600-86763200	Weak transcription	Primary B cells from cord blood	blood
20	chr4:86737800-86741200	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr4:86738800-86741200	Weak transcription	Fetal Kidney	kidney
22	chr4:86739200-86740200	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr4:86739400-86740200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr4:86739400-86740200	Enhancers	H9 Cell Line	embryonic stem cell
25	chr4:86739400-86740200	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr4:86739400-86740200	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr4:86739400-86740200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr4:86739600-86740200	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr4:86739600-86740200	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr4:86739600-86740600	Enhancers	Primary neutrophils fromperipheralblood	blood
31	chr4:86739800-86740200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
32	chr4:86739800-86740200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr4:86739800-86740600	Weak transcription	Fetal Brain Male	brain
34	chr4:86739800-86741200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr4:86740000-86740200	Enhancers	Fetal Lung	lung
36	chr4:86740000-86742600	Weak transcription	Monocytes-CD14+_RO01746	blood

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