Variant report

Variant	rs77290604
Chromosome Location	chr20:16559082-16559083
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762064	chr20:16558260-16568062	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
2	nsv1058496	chr20:16558260-16575531	Weak transcription Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:16556000-16559600	Weak transcription	Lung	lung
2	chr20:16556000-16560200	Weak transcription	Small Intestine	intestine
3	chr20:16556200-16559600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr20:16556200-16559800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr20:16556200-16560000	Weak transcription	Stomach Mucosa	stomach
6	chr20:16556200-16560400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr20:16556400-16559400	Weak transcription	Pancreas	Pancrea
8	chr20:16556400-16559600	Weak transcription	Esophagus	oesophagus
9	chr20:16556400-16559600	Weak transcription	Fetal Intestine Small	intestine
10	chr20:16556400-16559600	Weak transcription	Gastric	stomach
11	chr20:16556400-16559600	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr20:16556400-16559600	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr20:16556400-16559600	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr20:16556400-16560000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr20:16556400-16560000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr20:16556400-16560000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr20:16556400-16560000	Weak transcription	Fetal Kidney	kidney
18	chr20:16556400-16560000	Weak transcription	HMEC	breast
19	chr20:16556400-16560200	Weak transcription	HSMMtube	muscle
20	chr20:16556400-16560200	Weak transcription	NH-A	brain
21	chr20:16556400-16560800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr20:16556400-16560800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr20:16556400-16561000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr20:16556400-16562400	Weak transcription	Left Ventricle	heart
25	chr20:16556600-16559400	Weak transcription	Fetal Intestine Large	intestine
26	chr20:16556600-16559600	Weak transcription	NHDF-Ad	bronchial
27	chr20:16556600-16559800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr20:16556600-16559800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr20:16556600-16559800	Weak transcription	Fetal Brain Male	brain
30	chr20:16556600-16560000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr20:16556600-16560000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr20:16556600-16560000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr20:16556600-16560000	Weak transcription	Osteobl	bone
34	chr20:16556600-16560200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr20:16556600-16560200	Weak transcription	Fetal Lung	lung
36	chr20:16556600-16560200	Weak transcription	NHLF	lung
37	chr20:16556600-16560400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr20:16556600-16560600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr20:16556600-16560600	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr20:16556600-16560600	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr20:16556600-16560800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr20:16556600-16560800	Weak transcription	HUES6 Cell Line	embryonic stem cell
43	chr20:16556600-16560800	Weak transcription	Adipose Nuclei	Adipose
44	chr20:16556600-16560800	Weak transcription	Colon Smooth Muscle	Colon
45	chr20:16556600-16560800	Weak transcription	Stomach Smooth Muscle	stomach
46	chr20:16556600-16561000	Weak transcription	Colonic Mucosa	Colon
47	chr20:16556800-16559600	Weak transcription	Duodenum Mucosa	Duodenum
48	chr20:16556800-16560000	Weak transcription	NHEK	skin
49	chr20:16556800-16560200	Weak transcription	Duodenum Smooth Muscle	Duodenum
50	chr20:16556800-16560800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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