Variant report

Variant rs77336277
Chromosome Location chr6:118227961-118227962
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118226800-118228000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:118227400-118228200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr6:118227400-118230200 Active TSS Brain Angular Gyrus brain
4 chr6:118227400-118230400 Active TSS Brain Inferior Temporal Lobe brain
5 chr6:118227600-118228000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:118227600-118228000 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
7 chr6:118227600-118228000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
8 chr6:118227600-118228000 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
9 chr6:118227600-118228000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr6:118227600-118228000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr6:118227600-118228000 Flanking Active TSS Brain Anterior Caudate brain
12 chr6:118227600-118228000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
13 chr6:118227600-118228000 Enhancers Colonic Mucosa Colon
14 chr6:118227600-118228200 Active TSS Fetal Brain Male brain
15 chr6:118227600-118228200 Bivalent Enhancer Fetal Heart heart
16 chr6:118227600-118228800 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr6:118227600-118228800 Active TSS Stomach Smooth Muscle stomach
18 chr6:118227600-118229000 Bivalent Enhancer Liver Liver
19 chr6:118227600-118229000 Active TSS Brain Germinal Matrix brain
20 chr6:118227600-118229400 Active TSS Fetal Brain Female brain
21 chr6:118227600-118229600 Bivalent/Poised TSS Brain Hippocampus Middle brain
22 chr6:118227600-118230000 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
23 chr6:118227600-118230000 Active TSS Pancreatic Islets Pancreatic Islet
24 chr6:118227800-118228000 Flanking Bivalent TSS/Enh H9 Cell Line embryonic stem cell
25 chr6:118227800-118228000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
26 chr6:118227800-118228000 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
27 chr6:118227800-118228000 Flanking Active TSS iPS DF 6.9 Cell Line embryonic stem cell
28 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
30 chr6:118227800-118228000 Bivalent/Poised TSS Primary hematopoietic stem cells short term culture blood
31 chr6:118227800-118228000 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:118227800-118228000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Colon Smooth Muscle Colon
34 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
35 chr6:118227800-118228000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
36 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
37 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
38 chr6:118227800-118228000 Flanking Active TSS Fetal Kidney kidney
39 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Fetal Lung lung
40 chr6:118227800-118228000 Active TSS Fetal Muscle Trunk muscle
41 chr6:118227800-118228000 Bivalent Enhancer Fetal Muscle Leg muscle
42 chr6:118227800-118228000 Bivalent Enhancer Fetal Stomach stomach
43 chr6:118227800-118228000 Bivalent Enhancer Fetal Thymus thymus
44 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
45 chr6:118227800-118228000 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
46 chr6:118227800-118228000 Bivalent Enhancer Stomach Mucosa stomach
47 chr6:118227800-118228000 Bivalent Enhancer HSMMtube muscle
48 chr6:118227800-118228000 Flanking Bivalent TSS/Enh NH-A brain
49 chr6:118227800-118228200 Flanking Active TSS ES-WA7 Cell Line embryonic stem cell
50 chr6:118227800-118228200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived

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