The 2.0 version of rSNPBase

Variant report

Variant rs773430
Chromosome Location chr1:113536047-113536048
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113510600-113537000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:113510800-113541800 Weak transcription Fetal Muscle Trunk muscle
3 chr1:113511200-113538400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:113511200-113540000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:113511200-113540800 Weak transcription HSMM muscle
6 chr1:113511200-113545800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:113511200-113546400 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:113511200-113558000 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:113511200-113558600 Weak transcription NHDF-Ad bronchial
10 chr1:113511200-113564000 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:113511800-113540200 Weak transcription Fetal Intestine Small intestine
12 chr1:113513800-113536600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:113513800-113536800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:113513800-113541000 Weak transcription Hela-S3 cervix
15 chr1:113514000-113541200 Weak transcription K562 blood
16 chr1:113516800-113541000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:113517200-113540400 Weak transcription HepG2 liver
18 chr1:113517800-113542800 Weak transcription Dnd41 blood
19 chr1:113519600-113538600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:113526400-113540200 Weak transcription Brain Hippocampus Middle brain
21 chr1:113526400-113540600 Weak transcription Primary T cells from cord blood blood
22 chr1:113526400-113541600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:113526600-113564200 Weak transcription Placenta Placenta
24 chr1:113526800-113558600 Weak transcription GM12878-XiMat blood
25 chr1:113527000-113540600 Weak transcription Primary B cells from cord blood blood
26 chr1:113528200-113537000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:113528200-113556600 Weak transcription Small Intestine intestine
28 chr1:113528800-113537000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:113529000-113554400 Weak transcription Lung lung
30 chr1:113529400-113538400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:113529400-113540200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:113529600-113536800 Weak transcription Stomach Smooth Muscle stomach
33 chr1:113531000-113537000 Weak transcription Right Ventricle heart
34 chr1:113532200-113541600 Weak transcription Thymus Thymus
35 chr1:113532600-113538000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:113532800-113536400 Enhancers Skeletal Muscle Female skeletal muscle
37 chr1:113533000-113540400 Weak transcription Ovary ovary
38 chr1:113533200-113538000 Weak transcription HMEC breast
39 chr1:113533600-113555600 Weak transcription Fetal Lung lung
40 chr1:113534200-113540200 Weak transcription Brain Anterior Caudate brain
41 chr1:113534400-113538200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:113534400-113539200 Weak transcription Fetal Stomach stomach
43 chr1:113534400-113541400 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:113534400-113548400 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:113534600-113536400 Weak transcription Liver Liver
46 chr1:113534600-113538000 Weak transcription NHEK skin
47 chr1:113534600-113538200 Weak transcription Stomach Mucosa stomach
48 chr1:113534600-113538400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:113534600-113540200 Weak transcription Adipose Nuclei Adipose
50 chr1:113534600-113540200 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015