Variant report

Variant	rs77399479
Chromosome Location	chr12:48334722-48334723
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428589	chr12:48282920-48341192	Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	esv3355645	chr12:48334613-48335126	Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3399538	chr12:48334639-48335107	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv13465	chr12:48334654-48335149	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3521884	chr12:48334691-48335175	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv3521883	chr12:48334719-48335193	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:48328400-48337800	Enhancers	Fetal Heart	heart
2	chr12:48329400-48335200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr12:48332600-48339600	Weak transcription	NHDF-Ad	bronchial
4	chr12:48332800-48337400	Weak transcription	HMEC	breast
5	chr12:48332800-48337400	Weak transcription	NHEK	skin
6	chr12:48332800-48340200	Weak transcription	Right Atrium	heart
7	chr12:48333000-48335800	Weak transcription	Right Ventricle	heart
8	chr12:48333000-48339200	Weak transcription	HSMM	muscle
9	chr12:48333400-48335200	Weak transcription	Fetal Muscle Leg	muscle
10	chr12:48333400-48335800	Weak transcription	Spleen	Spleen
11	chr12:48333600-48336200	Weak transcription	Small Intestine	intestine
12	chr12:48333800-48337000	Weak transcription	Hela-S3	cervix
13	chr12:48334000-48336800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
14	chr12:48334200-48335200	Weak transcription	HSMMtube	muscle
15	chr12:48334200-48336600	Weak transcription	Rectal Mucosa Donor 31	rectum
16	chr12:48334400-48336400	Weak transcription	Colonic Mucosa	Colon
17	chr12:48334600-48335000	Weak transcription	Duodenum Mucosa	Duodenum
18	chr12:48334600-48335800	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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