Variant report

Variant	rs7743330
Chromosome Location	chr6:128131661-128131662
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12110839	1.00[AMR][1000 genomes]
rs6569515	1.00[AMR][1000 genomes]
rs6927863	1.00[AMR][1000 genomes]
rs6931807	1.00[AMR][1000 genomes]
rs6940050	0.91[YRI][hapmap];1.00[AMR][1000 genomes]
rs7749905	1.00[AMR][1000 genomes]
rs7750143	0.91[YRI][hapmap];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830799	chr6:128033100-128194511	Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:128115600-128139200	Weak transcription	Dnd41	blood
2	chr6:128119200-128134200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr6:128127600-128131800	Genic enhancers	Primary T helper cells PMA-I stimulated	--
4	chr6:128127600-128145800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr6:128127800-128134000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr6:128129400-128132400	Strong transcription	Fetal Thymus	thymus
7	chr6:128130400-128133200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
8	chr6:128130400-128136200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
9	chr6:128130800-128133200	Enhancers	Primary T killer memory cells from peripheral blood	blood
10	chr6:128130800-128134200	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr6:128131000-128133000	Genic enhancers	Primary T cells from cord blood	blood
12	chr6:128131400-128133200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr6:128131400-128134200	Genic enhancers	Thymus	Thymus
14	chr6:128131400-128135000	Genic enhancers	Primary T helper 17 cells PMA-I stimulated	--
15	chr6:128131600-128132200	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr6:128131600-128135200	Genic enhancers	Primary T cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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