The 2.0 version of rSNPBase

Variant report

Variant rs774767
Chromosome Location chr3:111807562-111807563
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111805000-111807600 Active TSS Rectal Mucosa Donor 29 rectum
2 chr3:111805200-111808000 Active TSS Pancreas Pancrea
3 chr3:111805600-111807600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
4 chr3:111805800-111809400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr3:111806000-111808800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr3:111806000-111809400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr3:111806000-111821600 Weak transcription Lung lung
8 chr3:111806400-111809000 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr3:111806400-111809200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr3:111806400-111809200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr3:111806400-111809400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr3:111806400-111809400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr3:111806400-111809600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:111806400-111811200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:111806400-111811200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr3:111806400-111811400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr3:111806600-111808000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr3:111806800-111807800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr3:111806800-111808800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:111806800-111808800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:111806800-111808800 Weak transcription Esophagus oesophagus
22 chr3:111806800-111808800 Weak transcription Left Ventricle heart
23 chr3:111806800-111809200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr3:111806800-111809400 Weak transcription Fetal Lung lung
25 chr3:111806800-111811200 Weak transcription NHLF lung
26 chr3:111806800-111811400 Weak transcription Gastric stomach
27 chr3:111806800-111813600 Weak transcription Rectal Smooth Muscle rectum
28 chr3:111806800-111816400 Weak transcription Aorta Aorta
29 chr3:111807000-111807600 Active TSS Fetal Thymus thymus
30 chr3:111807000-111807600 Active TSS Thymus Thymus
31 chr3:111807000-111808600 Weak transcription Colonic Mucosa Colon
32 chr3:111807000-111808800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:111807000-111808800 Weak transcription Fetal Intestine Large intestine
34 chr3:111807000-111808800 Weak transcription Placenta Amnion Placenta Amnion
35 chr3:111807000-111808800 Weak transcription HSMMtube muscle
36 chr3:111807000-111809000 Weak transcription HUVEC blood vessel
37 chr3:111807000-111809400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr3:111807000-111809400 Weak transcription Muscle Satellite Cultured Cells --
39 chr3:111807000-111809400 Weak transcription HSMM muscle
40 chr3:111807000-111809600 Weak transcription K562 blood
41 chr3:111807000-111811000 Weak transcription Osteobl bone
42 chr3:111807000-111811200 Weak transcription H1 Cell Line embryonic stem cell
43 chr3:111807000-111811200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr3:111807000-111811200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr3:111807000-111811200 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr3:111807000-111811200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr3:111807000-111811200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr3:111807000-111811200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr3:111807000-111811400 Weak transcription H9 Cell Line embryonic stem cell
50 chr3:111807000-111811400 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015