Variant report

Variant	rs77528500
Chromosome Location	chr1:197808157-197808158
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009697	chr1:197804294-197825037	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197806800-197809000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:197807000-197808400	Enhancers	Hela-S3	cervix
3	chr1:197807000-197808600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:197807000-197808600	Enhancers	HUVEC	blood vessel
5	chr1:197807000-197808600	Enhancers	NHDF-Ad	bronchial
6	chr1:197807200-197808200	Enhancers	HMEC	breast
7	chr1:197807200-197808400	Enhancers	A549	lung
8	chr1:197807200-197808600	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr1:197807200-197808600	Enhancers	Muscle Satellite Cultured Cells	--
10	chr1:197807200-197808600	Enhancers	Osteobl	bone
11	chr1:197807200-197808800	Enhancers	NHEK	skin
12	chr1:197807600-197808600	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr1:197807800-197808400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr1:197808000-197808400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr1:197808000-197810400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr1:197808000-197814400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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