Variant report

Variant	rs77529834
Chromosome Location	chr14:81902244-81902245
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:81684581..81688465-chr14:81899255..81904181,10	K562	blood:
2	chr14:81789758..81792094-chr14:81900694..81903096,3	MCF-7	breast:
3	chr14:81684220..81688666-chr14:81897892..81904337,14	K562	blood:
4	chr14:81683389..81688783-chr14:81897521..81903580,11	MCF-7	breast:
5	chr14:81768263..81770023-chr14:81899967..81902259,2	K562	blood:
6	chr14:81684709..81688864-chr14:81899235..81906709,16	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction
ENSG00000140022	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3358936	chr14:81786719-81928269	Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a
2	nsv1047694	chr14:81831147-82534026	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv542145	chr14:81831147-82534026	Weak transcription Active TSS Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
4	nsv510645	chr14:81874624-81907004	Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
5	esv1807931	chr14:81878972-81908605	Bivalent Enhancer Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
6	esv1842834	chr14:81878972-81908605	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Genic enhancers Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
7	esv1844298	chr14:81878972-81908605	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a
8	esv3442417	chr14:81901624-81904172	Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81900600-81902400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr14:81900800-81903400	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr14:81901000-81902400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr14:81901000-81903000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
5	chr14:81901000-81903600	Bivalent/Poised TSS	Fetal Kidney	kidney
6	chr14:81901200-81902600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
7	chr14:81901200-81903200	Active TSS	Brain Inferior Temporal Lobe	brain
8	chr14:81901200-81903600	Active TSS	H9 Cell Line	embryonic stem cell
9	chr14:81901400-81902400	Flanking Active TSS	Liver	Liver
10	chr14:81901400-81902400	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
11	chr14:81901400-81902400	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
12	chr14:81901400-81903000	Active TSS	Brain Cingulate Gyrus	brain
13	chr14:81901400-81903200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
14	chr14:81901400-81903200	Active TSS	Breast Myoepithelial Primary Cells	Breast
15	chr14:81901400-81903400	Active TSS	K562	blood
16	chr14:81901400-81903600	Active TSS	Brain Substantia Nigra	brain
17	chr14:81901400-81903600	Active TSS	Right Atrium	heart
18	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
19	chr14:81901600-81902400	Flanking Active TSS	Primary hematopoietic stem cells	blood
20	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr14:81901600-81902400	Flanking Active TSS	Adipose Nuclei	Adipose
23	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
24	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Placenta	Placenta
25	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
26	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
27	chr14:81901600-81902400	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
28	chr14:81901600-81902600	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
29	chr14:81901600-81902800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr14:81901600-81903000	Active TSS	iPS-18 Cell Line	embryonic stem cell
31	chr14:81901600-81903000	Active TSS	Brain Angular Gyrus	brain
32	chr14:81901600-81903000	Bivalent/Poised TSS	NHLF	lung
33	chr14:81901600-81903200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr14:81901600-81903200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr14:81901600-81903400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
36	chr14:81901600-81903400	Active TSS	Esophagus	oesophagus
37	chr14:81901600-81903400	Active TSS	Psoas Muscle	Psoas
38	chr14:81901600-81903600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
39	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
41	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
42	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
43	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary T helper 17 cells PMA-I stimulated	--
44	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
45	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
46	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
47	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
48	chr14:81901800-81902400	Flanking Bivalent TSS/Enh	Fetal Lung	lung
49	chr14:81901800-81902400	Flanking Active TSS	Lung	lung
50	chr14:81901800-81902400	Flanking Active TSS	Pancreas	Pancrea

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