Variant report

Variant rs7761980
Chromosome Location chr6:134568024-134568025
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134557800-134571000 Weak transcription NH-A brain
2 chr6:134561000-134569600 Weak transcription Ovary ovary
3 chr6:134561200-134568200 Weak transcription Brain Inferior Temporal Lobe brain
4 chr6:134561200-134568400 Weak transcription Brain Substantia Nigra brain
5 chr6:134561200-134568400 Weak transcription Esophagus oesophagus
6 chr6:134561800-134568200 Weak transcription Brain Hippocampus Middle brain
7 chr6:134562600-134569400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr6:134562600-134570600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr6:134562600-134574600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr6:134562800-134568600 Weak transcription Brain Anterior Caudate brain
11 chr6:134566000-134571400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:134566200-134568200 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr6:134566200-134568200 Enhancers Primary T helper cells PMA-I stimulated --
14 chr6:134566200-134568200 Enhancers Fetal Thymus thymus
15 chr6:134566200-134568600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr6:134566200-134568800 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr6:134566200-134568800 Enhancers NHEK skin
18 chr6:134566200-134569000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr6:134566200-134569000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:134566200-134569000 Enhancers HMEC breast
21 chr6:134566200-134570800 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr6:134566200-134571200 Enhancers Primary T cells fromperipheralblood blood
23 chr6:134566200-134572200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr6:134566200-134572200 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr6:134566200-134572200 Enhancers Primary T helper cells fromperipheralblood blood
26 chr6:134566200-134572200 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr6:134566200-134572800 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr6:134566400-134569400 Enhancers Primary monocytes fromperipheralblood blood
29 chr6:134566400-134570400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr6:134566600-134568200 Enhancers GM12878-XiMat blood
31 chr6:134566600-134568200 Weak transcription Hela-S3 cervix
32 chr6:134566600-134568800 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr6:134566600-134571000 Enhancers Primary B cells from peripheral blood blood
34 chr6:134566600-134571600 Enhancers Primary B cells from cord blood blood
35 chr6:134566800-134569400 Enhancers Primary neutrophils fromperipheralblood blood
36 chr6:134567000-134568200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr6:134567000-134570000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:134567000-134570400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:134567800-134568400 Weak transcription Fetal Muscle Trunk muscle
40 chr6:134567800-134569800 Enhancers Pancreas Pancrea
41 chr6:134567800-134570000 Enhancers HepG2 liver
42 chr6:134567800-134570800 Enhancers Thymus Thymus
43 chr6:134568000-134568400 Flanking Active TSS Primary T cells from cord blood blood
44 chr6:134568000-134568600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr6:134568000-134570600 Enhancers Skeletal Muscle Male skeletal muscle

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