Variant report

Variant	rs7767341
Chromosome Location	chr6:71613238-71613239
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12110901	1.00[EUR][1000 genomes]
rs12111243	1.00[EUR][1000 genomes]
rs12182033	1.00[EUR][1000 genomes]
rs56365444	1.00[EUR][1000 genomes]
rs59282007	1.00[EUR][1000 genomes]
rs60222660	1.00[EUR][1000 genomes]
rs60316641	1.00[EUR][1000 genomes]
rs61498740	1.00[EUR][1000 genomes]
rs6917091	1.00[EUR][1000 genomes]
rs73497926	1.00[EUR][1000 genomes]
rs73497994	1.00[EUR][1000 genomes]
rs73498002	1.00[EUR][1000 genomes]
rs73498904	1.00[EUR][1000 genomes]
rs73498909	1.00[EUR][1000 genomes]
rs73499815	1.00[EUR][1000 genomes]
rs73499826	1.00[EUR][1000 genomes]
rs7756861	1.00[EUR][1000 genomes]
rs7762477	1.00[EUR][1000 genomes]
rs9446299	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9455236	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv603639	chr6:71595151-71623253	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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