Variant report

Variant rs7768101
Chromosome Location chr6:56543628-56543629
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56526400-56549200 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr6:56527000-56554400 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr6:56529600-56553800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:56532600-56547200 Weak transcription HepG2 liver
5 chr6:56535200-56555200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr6:56535600-56548600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr6:56535600-56549200 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr6:56537000-56551800 Weak transcription Esophagus oesophagus
9 chr6:56537200-56545200 Weak transcription Ovary ovary
10 chr6:56537200-56545400 Weak transcription Gastric stomach
11 chr6:56537200-56547400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr6:56537200-56548000 Weak transcription Stomach Mucosa stomach
13 chr6:56537200-56548200 Weak transcription Small Intestine intestine
14 chr6:56537200-56548600 Weak transcription Colonic Mucosa Colon
15 chr6:56537200-56553400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr6:56537200-56555200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:56537400-56548400 Weak transcription Adipose Nuclei Adipose
18 chr6:56537600-56546400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:56537600-56547400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:56537600-56547400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr6:56537600-56547400 Weak transcription Fetal Lung lung
22 chr6:56537600-56548000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr6:56537600-56552600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:56537600-56553600 Weak transcription Fetal Stomach stomach
25 chr6:56537800-56545000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr6:56537800-56547200 Weak transcription Brain Angular Gyrus brain
27 chr6:56537800-56549400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr6:56538000-56545400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr6:56538000-56549200 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr6:56539000-56545200 Weak transcription Brain Anterior Caudate brain
31 chr6:56539000-56546200 Weak transcription Liver Liver
32 chr6:56539200-56548000 Weak transcription Fetal Intestine Large intestine
33 chr6:56540000-56548400 Weak transcription Hela-S3 cervix
34 chr6:56540200-56543800 Weak transcription Brain Cingulate Gyrus brain
35 chr6:56540200-56547400 Weak transcription Fetal Muscle Leg muscle
36 chr6:56542000-56544200 Enhancers Skeletal Muscle Male skeletal muscle
37 chr6:56542200-56544200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr6:56542600-56544200 Enhancers Brain Substantia Nigra brain
39 chr6:56542800-56544000 Enhancers Brain Inferior Temporal Lobe brain
40 chr6:56542800-56546200 Weak transcription NH-A brain
41 chr6:56542800-56548000 Weak transcription NHEK skin
42 chr6:56542800-56548200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr6:56542800-56548200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr6:56542800-56548400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr6:56543000-56544000 Weak transcription Left Ventricle heart
46 chr6:56543000-56544200 Weak transcription Fetal Intestine Small intestine
47 chr6:56543000-56545400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr6:56543000-56545400 Weak transcription Psoas Muscle Psoas
49 chr6:56543000-56545600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr6:56543000-56546000 Weak transcription Right Ventricle heart

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