Variant report

Variant	rs77684977
Chromosome Location	chr6:147324144-147324145
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:147220668..147222971-chr6:147322912..147325249,2	K562	blood:
2	chr6:147321773..147324598-chr6:147327146..147330616,3	K562	blood:
3	chr6:147318279..147319788-chr6:147321898..147324493,2	MCF-7	breast:
4	chr6:147321773..147324598-chr6:147327146..147330616,4	K562	blood:
5	chr6:147315835..147318626-chr6:147323386..147326215,2	K562	blood:
6	chr6:147299417..147300923-chr6:147323838..147325399,2	K562	blood:
7	chr6:147205157..147208020-chr6:147323168..147325113,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13776	chr6:147324012-147334530	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147322000-147325000	Weak transcription	Psoas Muscle	Psoas
2	chr6:147322600-147326400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr6:147322800-147324200	Weak transcription	HSMMtube	muscle
4	chr6:147323200-147324200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr6:147323200-147325000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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