Variant report

Variant	rs77705923
Chromosome Location	chr2:10430957-10430958
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530829	chr2:10357105-10655131	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
2	nsv873639	chr2:10372061-10475308	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	esv3429635	chr2:10430701-10432874	Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10426200-10438000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr2:10426800-10437600	Weak transcription	Spleen	Spleen
3	chr2:10428800-10431000	Enhancers	HMEC	breast
4	chr2:10428800-10431000	Enhancers	Osteobl	bone
5	chr2:10429200-10431000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr2:10429200-10431000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr2:10429200-10431000	Enhancers	HSMM	muscle
8	chr2:10429400-10431800	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr2:10429600-10436800	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr2:10430000-10431000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr2:10430000-10431000	Enhancers	NHDF-Ad	bronchial
12	chr2:10430200-10431000	Enhancers	NHEK	skin
13	chr2:10430200-10435400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr2:10430400-10431000	Enhancers	Muscle Satellite Cultured Cells	--
15	chr2:10430800-10435200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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