Variant report

Variant	rs77745360
Chromosome Location	chr14:45759162-45759163
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr14:45759123-45759283	MCF-7	breast:	n/a	n/a
2	POLR2A	chr14:45759148-45759286	MCF-7	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:45759143-45759193	LNCaP	prostate:	n/a
2	chr14:45759143-45759193	U87	brain:	n/a
3	chr14:45759143-45759193	HCF	heart:	n/a
4	chr14:45759143-45759193	PFSK-1	brain:	n/a
5	chr14:45759143-45759193	HMEC	breast:	n/a
6	chr14:45759143-45759193	HCT-116	colon:	n/a
7	chr14:45759143-45759193	HCPEpiC	choroid plexus:	n/a
8	chr14:45759143-45759193	IMR90	lung:	fetal
9	chr14:45759143-45759193	HEK293	kidney:	embryo
10	chr14:45759143-45759193	HRPEpiC	eye:	n/a
11	chr14:45759143-45759193	H1-hESC	embryonic stem cell:	embryo
12	chr14:45759143-45759193	NB4	blood:	n/a
13	chr14:45759143-45759193	HIPEpiC	eye:	n/a
14	chr14:45759143-45759193	PANC-1	pancreas:	n/a
15	chr14:45759143-45759193	NHDF-neo	bronchial:	n/a
16	chr14:45759143-45759193	Jurkat	blood:	n/a
17	chr14:45759143-45759193	HepG2	liver:	n/a
18	chr14:45759143-45759193	T-47D	breast:	n/a
19	chr14:45759143-45759193	AG04450	lung:	fetal
20	chr14:45759143-45759193	K562	blood:	n/a
21	chr14:45759143-45759193	PrEC	prostate:	n/a
22	chr14:45759143-45759193	MCF10A-Er-Src	breast:	n/a
23	chr14:45759143-45759193	HNPCEpiC	eye:	n/a
24	chr14:45759143-45759193	SK-N-SH	brain:	n/a
25	chr14:45759143-45759193	SKMC	muscle:	n/a
26	chr14:45759143-45759193	HAEpiC	amniotic membrane:	n/a
27	chr14:45759143-45759193	HEEpiC	esophagus:	n/a
28	chr14:45759143-45759193	HPAEpiC	pulmonary alveolar:	n/a
29	chr14:45759143-45759193	AG09309	skin:	n/a
30	chr14:45759143-45759193	Hepatocyte	liver:	n/a
31	chr14:45759143-45759193	MCF-7	breast:	n/a
32	chr14:45759143-45759193	RPTEC	kidney:	n/a
33	chr14:45759143-45759193	GM12878	blood:	n/a
34	chr14:45759143-45759193	BJ	skin:	n/a
35	chr14:45759143-45759193	ECC-1	luminal epithelium:	n/a
36	chr14:45759143-45759193	SAEC	small airway:	n/a
37	chr14:45759143-45759193	HRE	kidney:	n/a
38	chr14:45759143-45759193	HUVEC	blood vessel:	n/a
39	chr14:45759143-45759193	HRCEpiC	kidney:	n/a
40	chr14:45759143-45759193	SK-N-SH_RA	brain:	n/a
41	chr14:45759143-45759193	AG04449	skin:	fetal
42	chr14:45759143-45759193	ProgFib	skin:	n/a
43	chr14:45759143-45759193	GM19239	blood:	n/a
44	chr14:45759143-45759193	HL-60	blood:	n/a
45	chr14:45759143-45759193	AoSMC	blood vessel:	n/a
46	chr14:45759143-45759193	Hela-S3	cervix:	n/a
47	chr14:45759143-45759193	HCM	heart:	n/a
48	chr14:45759143-45759193	AG10803	skin:	n/a
49	chr14:45759143-45759193	GM12891	blood:	n/a
50	chr14:45759143-45759193	CMK	blood:	n/a

No data

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FANCM-8	chr14:45759144-45759367	NONHSAT036652

No data

Variant related genes	Relation type
DNAJC19P9	TF binding region
DNAJC19P9	CpG island

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901843	chr14:45506857-45833490	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv530814	chr14:45604432-46198418	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv901844	chr14:45606287-46063731	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv1044445	chr14:45606779-45807171	Transcr. at gene 5' and 3' Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
5	nsv901845	chr14:45619217-45772910	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
6	nsv901846	chr14:45702358-45783546	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv564726	chr14:45702358-45911581	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
8	esv2758357	chr14:45706082-45982410	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
9	esv2759987	chr14:45706082-45982410	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
10	nsv527140	chr14:45748246-45783546	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
11	nsv1052383	chr14:45753937-45834141	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv1052588	chr14:45753937-46003738	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
13	nsv916721	chr14:45753973-45979614	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
14	nsv974334	chr14:45757028-45759503	Enhancers	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
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