Variant report

Variant	rs77818472
Chromosome Location	chr5:35740644-35740645
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525477	chr5:35530905-35792990	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv968824	chr5:35740416-35743870	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35737000-35741200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr5:35737400-35743000	Weak transcription	Fetal Kidney	kidney
3	chr5:35739600-35741600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr5:35739800-35741400	Enhancers	Muscle Satellite Cultured Cells	--
5	chr5:35739800-35742600	Weak transcription	Pancreas	Pancrea
6	chr5:35740400-35742000	Enhancers	HepG2	liver
7	chr5:35740600-35741400	Weak transcription	HUVEC	blood vessel
8	chr5:35740600-35742000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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