Variant report

Variant	rs77850737
Chromosome Location	chr20:23405796-23405797
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063655	chr20:23396649-23489730	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv523998	chr20:23405281-23406519	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:23402400-23406000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr20:23402600-23405800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr20:23402600-23405800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr20:23402600-23406000	Weak transcription	NHEK	skin
5	chr20:23403200-23406200	Enhancers	Fetal Thymus	thymus
6	chr20:23405600-23406200	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
7	chr20:23405600-23406200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr20:23405600-23406200	Flanking Active TSS	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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