Variant report

Variant	rs7788063
Chromosome Location	chr7:14316254-14316255
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10085673	1.00[EUR][1000 genomes]
rs10248432	1.00[EUR][1000 genomes]
rs10270714	1.00[EUR][1000 genomes]
rs17167967	1.00[EUR][1000 genomes]
rs17168048	1.00[YRI][hapmap]
rs17168052	1.00[YRI][hapmap]
rs6461084	1.00[EUR][1000 genomes]
rs6944496	1.00[EUR][1000 genomes]
rs740398	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14311600-14316800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr7:14311600-14318200	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr7:14315800-14317000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:14316200-14318000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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