Variant report

Variant rs7789145
Chromosome Location chr7:16956883-16956884
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:16942600-16961600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:16952200-16957000 Enhancers Placenta Placenta
3 chr7:16953600-16961200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr7:16954400-16957000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
5 chr7:16955400-16957000 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr7:16955400-16957800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
7 chr7:16955600-16957000 Enhancers HUES64 Cell Line embryonic stem cell
8 chr7:16955600-16957600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr7:16955600-16957800 Enhancers Fetal Intestine Small intestine
10 chr7:16955600-16958000 Enhancers Fetal Intestine Large intestine
11 chr7:16955600-16958200 Enhancers Stomach Mucosa stomach
12 chr7:16955600-16958600 Enhancers Hela-S3 cervix
13 chr7:16955600-16961600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr7:16955800-16957200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:16956000-16957000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr7:16956000-16957000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr7:16956000-16957600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr7:16956200-16957200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr7:16956200-16957200 Weak transcription HSMMtube muscle
20 chr7:16956200-16957400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr7:16956200-16958000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr7:16956200-16958000 Enhancers Placenta Amnion Placenta Amnion
23 chr7:16956200-16960800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr7:16956400-16957000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr7:16956400-16957000 Enhancers Primary B cells from peripheral blood blood
26 chr7:16956400-16961000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr7:16956600-16957000 Weak transcription Muscle Satellite Cultured Cells --
28 chr7:16956600-16957000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr7:16956600-16957200 Enhancers A549 lung
30 chr7:16956600-16957800 Enhancers HMEC breast
31 chr7:16956600-16962800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr7:16956800-16957000 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr7:16956800-16957200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr7:16956800-16957200 Weak transcription NH-A brain
35 chr7:16956800-16957600 Weak transcription H9 Cell Line embryonic stem cell
36 chr7:16956800-16957600 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr7:16956800-16958600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr7:16956800-16958600 Enhancers NHEK skin
39 chr7:16956800-16960200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr7:16956800-16960200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr7:16956800-16961200 Weak transcription Osteobl bone

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