Variant report

Variant	rs7791093
Chromosome Location	chr7:27962929-27962930
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27957341..27960196-chr7:27962479..27964875,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12531234	0.86[MKK][hapmap]
rs6948511	0.85[CHB][hapmap]
rs7791865	0.85[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949025	chr7:27578167-28075172	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	esv2758109	chr7:27793616-27972869	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	esv2759520	chr7:27793616-27972869	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv1030685	chr7:27844038-28177301	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
5	nsv1024819	chr7:27949955-28020969	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27941400-27990800	Weak transcription	Primary T cells from cord blood	blood
2	chr7:27942400-28005600	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr7:27950400-27963000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr7:27951400-27963000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:27954600-27963000	Weak transcription	Left Ventricle	heart
6	chr7:27956600-27979800	Weak transcription	Aorta	Aorta
7	chr7:27957200-27979000	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr7:27957400-27963200	Weak transcription	Stomach Smooth Muscle	stomach
9	chr7:27957600-27969200	Weak transcription	Duodenum Smooth Muscle	Duodenum
10	chr7:27957600-28000800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr7:27957800-27973400	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr7:27960200-27964400	Enhancers	Dnd41	blood
13	chr7:27961000-27963000	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr7:27961000-27963000	Weak transcription	Fetal Brain Female	brain
15	chr7:27961000-27963000	Weak transcription	HSMM	muscle
16	chr7:27961000-27963200	Weak transcription	Psoas Muscle	Psoas
17	chr7:27961000-27968000	Weak transcription	Brain Substantia Nigra	brain
18	chr7:27961000-27976000	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr7:27961000-27983400	Weak transcription	NH-A	brain
20	chr7:27961200-27963000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr7:27961200-27963400	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr7:27961200-27964200	Weak transcription	NHLF	lung
23	chr7:27961400-27963000	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr7:27961400-27967000	Weak transcription	Brain Cingulate Gyrus	brain
25	chr7:27962200-27963000	Enhancers	NHDF-Ad	bronchial
26	chr7:27962400-27963200	Enhancers	Colon Smooth Muscle	Colon
27	chr7:27962400-27963400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr7:27962400-27963400	Enhancers	Rectal Mucosa Donor 29	rectum
29	chr7:27962400-27963600	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr7:27962400-27963600	Enhancers	GM12878-XiMat	blood
31	chr7:27962400-27963800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr7:27962400-27963800	Enhancers	Primary B cells from peripheral blood	blood
33	chr7:27962400-27963800	Enhancers	Fetal Muscle Leg	muscle
34	chr7:27962400-27963800	Enhancers	HSMMtube	muscle
35	chr7:27962400-27964600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr7:27962400-27964800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:27962600-27963200	Enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr7:27962600-27963400	Enhancers	iPS-18 Cell Line	embryonic stem cell
39	chr7:27962600-27963400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr7:27962600-27963400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
41	chr7:27962600-27963400	Enhancers	Fetal Muscle Trunk	muscle
42	chr7:27962600-27963600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr7:27962600-27963600	Enhancers	HUES6 Cell Line	embryonic stem cell
44	chr7:27962600-27963600	Enhancers	Adipose Nuclei	Adipose
45	chr7:27962600-27963600	Enhancers	Right Atrium	heart
46	chr7:27962600-27963600	Enhancers	Right Ventricle	heart
47	chr7:27962600-27963600	Enhancers	Skeletal Muscle Female	skeletal muscle
48	chr7:27962600-27964000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr7:27962600-27964600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr7:27962600-27964600	Enhancers	Osteobl	bone

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