Variant report

Variant	rs7793181
Chromosome Location	chr7:151036101-151036102
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10244595	1.00[AMR][1000 genomes]
rs2429249	1.00[ASW][hapmap];1.00[LWK][hapmap];0.90[MKK][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2487148	1.00[AMR][1000 genomes]
rs2792450	1.00[AMR][1000 genomes]
rs57667546	1.00[AMR][1000 genomes]
rs61163467	1.00[AMR][1000 genomes]
rs73727482	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1794696	chr7:151023630-151049503	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:151032800-151036800	ZNF genes & repeats	GM12878-XiMat	blood
2	chr7:151034000-151037400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr7:151034800-151038200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr7:151035800-151038400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr7:151035800-151038800	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr7:151036000-151036600	Enhancers	HepG2	liver
7	chr7:151036000-151038200	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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