Variant report

rSNPs within LD-proxies of this variant (count:11)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606426	chr7:25254125-25621579	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
4	nsv1033664	chr7:25471881-25503391	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1033757	chr7:25472222-25504421	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25493400-25497000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:25493400-25497000	Enhancers	Fetal Lung	lung
3	chr7:25493600-25497000	Enhancers	Adipose Nuclei	Adipose
4	chr7:25494000-25495800	Enhancers	Placenta	Placenta
5	chr7:25494200-25496800	Enhancers	Lung	lung
6	chr7:25494200-25497000	Enhancers	Colon Smooth Muscle	Colon
7	chr7:25494400-25497200	Enhancers	Ovary	ovary
8	chr7:25494600-25496800	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr7:25494800-25495800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr7:25494800-25496400	Enhancers	Spleen	Spleen
11	chr7:25495000-25496000	Weak transcription	Fetal Kidney	kidney
12	chr7:25495000-25496000	Weak transcription	Stomach Smooth Muscle	stomach
13	chr7:25495000-25496200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr7:25495000-25496200	Weak transcription	Fetal Muscle Leg	muscle
15	chr7:25495000-25496200	Weak transcription	Psoas Muscle	Psoas
16	chr7:25495000-25497000	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr7:25495200-25496200	Weak transcription	Fetal Stomach	stomach
18	chr7:25495200-25496800	Enhancers	Small Intestine	intestine
19	chr7:25495400-25496600	Enhancers	Aorta	Aorta
20	chr7:25495400-25496800	Enhancers	Right Atrium	heart
21	chr7:25495400-25497200	Enhancers	Brain Anterior Caudate	brain

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