Variant report

Variant	rs7803922
Chromosome Location	chr7:33313026-33313027
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11974148	1.00[CEU][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6947669	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs6949559	1.00[CEU][hapmap]
rs7781257	1.00[CEU][hapmap]
rs7805100	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830943	chr7:33167106-33352759	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
2	nsv606610	chr7:33218763-33486316	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1016416	chr7:33241443-33559477	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv916660	chr7:33272493-33506384	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	esv1792546	chr7:33304218-33346932	ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv887925	chr7:33304218-33361323	ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:33283800-33316000	Weak transcription	Ovary	ovary
2	chr7:33288800-33317600	Weak transcription	Gastric	stomach
3	chr7:33290000-33316200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr7:33290800-33316400	Weak transcription	Aorta	Aorta
5	chr7:33291200-33316000	Weak transcription	Primary T cells from cord blood	blood
6	chr7:33302200-33317400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr7:33305800-33317400	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr7:33306200-33316200	Weak transcription	Pancreas	Pancrea
9	chr7:33307600-33315000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr7:33308200-33316000	Weak transcription	Left Ventricle	heart
11	chr7:33308200-33316200	Weak transcription	Lung	lung
12	chr7:33308600-33316400	Weak transcription	Spleen	Spleen
13	chr7:33309400-33316200	Weak transcription	Fetal Stomach	stomach
14	chr7:33311000-33316400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr7:33311200-33313800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr7:33311200-33317400	Weak transcription	Primary T helper cells fromperipheralblood	blood
17	chr7:33311200-33317600	Weak transcription	Psoas Muscle	Psoas
18	chr7:33311200-33325200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr7:33311800-33316800	Weak transcription	Primary B cells from peripheral blood	blood
20	chr7:33311800-33317000	Weak transcription	Fetal Intestine Large	intestine
21	chr7:33312000-33316200	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr7:33312000-33317800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr7:33312400-33316000	Weak transcription	Adipose Nuclei	Adipose
24	chr7:33312400-33316800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr7:33313000-33313600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood

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