Variant report

Variant	rs7806660
Chromosome Location	chr7:120326254-120326255
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs34238259	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4727911	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4730967	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4730970	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs60500498	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs66889324	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7790449	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7804315	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524688	chr7:120305149-120327349	Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv1795107	chr7:120319916-120327440	Enhancers Bivalent Enhancer Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120324800-120332200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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