Variant report

Variant	rs7807497
Chromosome Location	chr7:22398170-22398171
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10499550	0.83[ASN][1000 genomes]
rs17146725	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs59467849	0.83[ASN][1000 genomes]
rs59776563	0.83[ASN][1000 genomes]
rs61117472	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830923	chr7:22316841-22494973	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv3445637	chr7:22395652-22398200	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:22397400-22398200	Enhancers	Esophagus	oesophagus
2	chr7:22397400-22399200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr7:22397400-22399400	Enhancers	Liver	Liver
4	chr7:22397400-22399800	Enhancers	Fetal Intestine Large	intestine
5	chr7:22397400-22400800	Weak transcription	Fetal Heart	heart
6	chr7:22397400-22403600	Weak transcription	Primary B cells from peripheral blood	blood
7	chr7:22397600-22398200	Enhancers	Pancreas	Pancrea
8	chr7:22397600-22399600	Enhancers	Fetal Intestine Small	intestine
9	chr7:22397600-22401000	Weak transcription	Lung	lung
10	chr7:22397800-22401000	Weak transcription	Stomach Mucosa	stomach
11	chr7:22397800-22401600	Weak transcription	Fetal Brain Male	brain
12	chr7:22397800-22404800	Weak transcription	Brain Angular Gyrus	brain
13	chr7:22398000-22398400	Enhancers	HepG2	liver
14	chr7:22398000-22400600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr7:22398000-22401200	Weak transcription	Rectal Mucosa Donor 31	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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