Variant report

Variant	rs78097225
Chromosome Location	chr10:23015526-23015527
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831809	chr10:22918101-23069676	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv550210	chr10:23012096-23064702	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3520789	chr10:23014898-23019504	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3480396	chr10:23015429-23016862	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3496567	chr10:23015459-23016864	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3496570	chr10:23015466-23016836	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3496568	chr10:23015479-23016791	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3480174	chr10:23015484-23016830	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3480285	chr10:23015486-23016823	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3480618	chr10:23015493-23016782	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3496566	chr10:23015503-23016804	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3496569	chr10:23015509-23016803	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23004400-23016400	Weak transcription	Brain Anterior Caudate	brain
2	chr10:23004400-23017800	Weak transcription	Spleen	Spleen
3	chr10:23009800-23016600	Weak transcription	Brain Angular Gyrus	brain
4	chr10:23012600-23015800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:23014000-23015800	Weak transcription	Primary B cells from peripheral blood	blood
6	chr10:23014000-23016000	Weak transcription	GM12878-XiMat	blood
7	chr10:23014000-23016600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr10:23014000-23017200	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr10:23014600-23016400	Weak transcription	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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