Variant report

Variant	rs7810632
Chromosome Location	chr7:70259839-70259840
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs28694156	1.00[EUR][1000 genomes]
rs57759557	1.00[EUR][1000 genomes]
rs7781341	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3341834	chr7:69968031-70288098	Weak transcription ZNF genes & repeats Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1025164	chr7:70061655-70469358	Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Weak transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv538931	chr7:70061655-70469358	Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv1017876	chr7:70073764-70434599	Enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
6	nsv1022747	chr7:70169254-70301285	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv429771	chr7:70188375-70294296	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv1028853	chr7:70211620-70523331	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv533212	chr7:70220687-70511129	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv1022759	chr7:70236919-70292317	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv888341	chr7:70249358-70316365	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
12	nsv429772	chr7:70250125-70357061	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
13	nsv607437	chr7:70251651-70568354	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:80 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70248200-70260200	Strong transcription	Fetal Stomach	stomach
2	chr7:70248600-70260400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:70251600-70260600	Weak transcription	Fetal Kidney	kidney
4	chr7:70252000-70260200	Weak transcription	Primary B cells from cord blood	blood
5	chr7:70252400-70262200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr7:70252600-70266000	Weak transcription	Fetal Brain Male	brain
7	chr7:70252800-70261200	Weak transcription	Colon Smooth Muscle	Colon
8	chr7:70254600-70262200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr7:70255400-70261600	Weak transcription	Brain Hippocampus Middle	brain
10	chr7:70255600-70260200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr7:70255600-70262800	Weak transcription	Pancreas	Pancrea
12	chr7:70255800-70262200	Weak transcription	Primary B cells from peripheral blood	blood
13	chr7:70256000-70260400	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr7:70256000-70261600	Weak transcription	Lung	lung
15	chr7:70256000-70262200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr7:70256000-70264000	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr7:70256200-70261600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr7:70256200-70262000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr7:70256200-70262400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr7:70256200-70262600	Weak transcription	Brain Cingulate Gyrus	brain
21	chr7:70256400-70261600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr7:70256400-70261600	Weak transcription	Right Ventricle	heart
23	chr7:70256400-70264000	Weak transcription	Stomach Smooth Muscle	stomach
24	chr7:70256600-70261400	Weak transcription	Brain Substantia Nigra	brain
25	chr7:70256600-70261600	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr7:70256600-70263000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr7:70256800-70260200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr7:70256800-70261600	Weak transcription	NH-A	brain
29	chr7:70256800-70264000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr7:70257000-70260400	Weak transcription	Brain Anterior Caudate	brain
31	chr7:70257000-70261400	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr7:70257000-70261600	Weak transcription	NHLF	lung
33	chr7:70257000-70262200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr7:70257000-70267200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr7:70257200-70260200	Weak transcription	Skeletal Muscle Female	skeletal muscle
36	chr7:70257200-70261000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr7:70257200-70261200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr7:70257200-70262200	Weak transcription	Thymus	Thymus
39	chr7:70257200-70263000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr7:70257200-70263000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr7:70257400-70264200	Weak transcription	Fetal Muscle Leg	muscle
42	chr7:70257400-70264800	Weak transcription	HSMM	muscle
43	chr7:70258000-70264400	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr7:70258200-70260200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr7:70258200-70260200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
46	chr7:70258200-70260400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr7:70258200-70261200	Weak transcription	Left Ventricle	heart
48	chr7:70258200-70262600	Weak transcription	Fetal Lung	lung
49	chr7:70258200-70263800	Weak transcription	Brain Germinal Matrix	brain
50	chr7:70258200-70264200	Weak transcription	HSMMtube	muscle

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