Variant report

Variant	rs7813154
Chromosome Location	chr8:103439871-103439872
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7817697	1.00[AMR][1000 genomes]
rs7826374	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033829	chr8:103110057-103525696	Strong transcription Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1025935	chr8:103199207-103468322	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
3	nsv891244	chr8:103309862-103483466	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
4	nsv831412	chr8:103337196-103536397	Genic enhancers Strong transcription Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
5	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
6	nsv1023938	chr8:103369215-103538708	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103430600-103444400	Weak transcription	GM12878-XiMat	blood
2	chr8:103437200-103440400	Enhancers	HepG2	liver
3	chr8:103438600-103449200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:103439400-103440000	Enhancers	H1 Cell Line	embryonic stem cell
5	chr8:103439400-103440400	Enhancers	Colon Smooth Muscle	Colon
6	chr8:103439400-103440600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:103439600-103440000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:103439600-103440000	Enhancers	Ovary	ovary
9	chr8:103439600-103440400	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr8:103439600-103440400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr8:103439600-103440400	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr8:103439600-103440400	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr8:103439600-103440400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr8:103439600-103440400	Enhancers	Fetal Stomach	stomach
15	chr8:103439600-103440600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr8:103439600-103440600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr8:103439800-103440000	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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