Variant report

Variant	rs7815684
Chromosome Location	chr8:34273504-34273505
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10099045	0.81[ASN][1000 genomes]
rs10100459	0.81[ASN][1000 genomes]
rs10503960	0.83[EUR][1000 genomes]
rs12375320	0.82[ASN][1000 genomes]
rs12541833	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12544107	0.91[ASN][1000 genomes]
rs12546239	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12547877	0.82[ASN][1000 genomes]
rs12674612	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12678112	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1463511	0.83[EUR][1000 genomes]
rs16881987	0.83[EUR][1000 genomes]
rs16882108	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16882116	0.91[ASN][1000 genomes]
rs16882122	0.91[ASN][1000 genomes]
rs16882264	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1870388	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2028776	0.85[ASN][1000 genomes]
rs2219476	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28503648	0.85[ASN][1000 genomes]
rs28545279	0.83[ASN][1000 genomes]
rs4545096	0.91[ASN][1000 genomes]
rs4739545	0.83[EUR][1000 genomes]
rs4739565	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55752257	0.82[ASN][1000 genomes]
rs55849895	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56355533	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59516528	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6468262	0.82[ASN][1000 genomes]
rs6993906	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6997676	0.91[ASN][1000 genomes]
rs7012266	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7012499	0.82[ASN][1000 genomes]
rs72634615	0.91[ASN][1000 genomes]
rs7464162	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7816886	0.85[ASN][1000 genomes]
rs7823416	0.88[JPT][hapmap]
rs7827467	0.82[ASN][1000 genomes]
rs7834257	0.85[ASN][1000 genomes]
rs7836137	0.85[ASN][1000 genomes]
rs9656769	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs992046	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34269600-34278800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr8:34270400-34276400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links