Variant report

Variant	rs7827955
Chromosome Location	chr8:91321732-91321733
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16904079	1.00[AMR][1000 genomes]
rs16904083	1.00[AMR][1000 genomes]
rs16904103	1.00[AMR][1000 genomes]
rs16904120	1.00[AMR][1000 genomes]
rs6993354	1.00[AMR][1000 genomes]
rs7003728	1.00[AMR][1000 genomes]
rs7821641	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91314800-91341200	Weak transcription	K562	blood
2	chr8:91319200-91323200	Weak transcription	Ovary	ovary
3	chr8:91321000-91323600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:91321400-91322000	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr8:91321400-91322000	Enhancers	Dnd41	blood
6	chr8:91321600-91323600	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr8:91321600-91324000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr8:91321600-91324200	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr8:91321600-91324200	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr8:91321600-91325400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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