Variant report

Variant	rs78282888
Chromosome Location	chr10:94115634-94115635
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94113172..94116160-chr10:94117822..94119572,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046258	chr10:93866969-94466106	Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
2	nsv508600	chr10:94115025-94231917	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	nsv7492	chr10:94115207-94138463	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94110000-94115800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:94110200-94115800	Weak transcription	Fetal Kidney	kidney
3	chr10:94110200-94115800	Weak transcription	HSMMtube	muscle
4	chr10:94110600-94115800	Weak transcription	Pancreas	Pancrea
5	chr10:94110600-94116000	Weak transcription	Fetal Muscle Leg	muscle
6	chr10:94110600-94116200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr10:94110800-94116000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr10:94111000-94116000	Weak transcription	Primary B cells from cord blood	blood
9	chr10:94111200-94115800	Weak transcription	Right Ventricle	heart
10	chr10:94111200-94116000	Weak transcription	Primary T cells from cord blood	blood
11	chr10:94111200-94116000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:94111200-94116200	Weak transcription	Dnd41	blood
13	chr10:94111400-94116000	Weak transcription	Fetal Brain Male	brain
14	chr10:94111400-94116200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:94111400-94116600	Weak transcription	HSMM	muscle
16	chr10:94112000-94116600	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr10:94112200-94116200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr10:94112200-94116200	Weak transcription	A549	lung
19	chr10:94112400-94117200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr10:94113400-94116800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr10:94114800-94115800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr10:94114800-94116000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr10:94114800-94116400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr10:94115400-94116000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr10:94115600-94116000	Enhancers	H1 Cell Line	embryonic stem cell
26	chr10:94115600-94116000	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr10:94115600-94116000	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr10:94115600-94116000	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr10:94115600-94116200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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