Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11987492	0.90[ASN][1000 genomes]
rs12547435	0.94[ASN][1000 genomes]
rs13268119	0.92[ASN][1000 genomes]
rs13275686	0.92[ASN][1000 genomes]
rs13276668	0.89[ASN][1000 genomes]
rs13282524	0.89[ASN][1000 genomes]
rs34518674	0.87[EUR][1000 genomes]
rs35155372	0.87[EUR][1000 genomes]
rs36051160	0.90[ASN][1000 genomes]
rs4128327	0.89[ASN][1000 genomes]
rs4332103	0.89[ASN][1000 genomes]
rs4404885	0.87[EUR][1000 genomes]
rs4469429	0.94[ASN][1000 genomes]
rs4484663	0.89[ASN][1000 genomes]
rs4496941	0.92[ASN][1000 genomes]
rs4735081	0.87[EUR][1000 genomes]
rs6469214	0.87[EUR][1000 genomes]
rs6984863	0.89[ASN][1000 genomes]
rs6986786	0.88[ASN][1000 genomes]
rs6988172	0.89[ASN][1000 genomes]
rs7008544	0.87[EUR][1000 genomes]
rs7012212	0.89[ASN][1000 genomes]
rs7013074	0.84[ASN][1000 genomes]
rs7460371	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7818014	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022273	chr8:110026712-110146600	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv539715	chr8:110026712-110146600	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv891271	chr8:110054427-110101683	Enhancers Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110075000-110083400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:110077600-110084600	Weak transcription	K562	blood
3	chr8:110079000-110083800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:110079200-110089800	Weak transcription	Left Ventricle	heart
5	chr8:110081400-110081800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

Quick Search: