Variant report

Variant	rs78296415
Chromosome Location	chr7:27200965-27200966
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr7:27200134-27201009	ECC-1	luminal epithelium:	n/a	chr7:27200860-27200869
2	TCF7L2	chr7:27200605-27201207	HEK293	kidney:	n/a	chr7:27201097-27201106
3	TEAD4	chr7:27200478-27200996	A549	lung:	n/a	n/a
4	RAD21	chr7:27200339-27201113	A549	lung:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
5	RAD21	chr7:27200051-27201214	SK-N-SH	brain:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
6	RAD21	chr7:27200443-27200989	SK-N-SH_RA	brain:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
7	CTCF	chr7:27200452-27200965	A549	lung:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771
8	MAX	chr7:27200076-27200981	MCF-7	breast:	n/a	chr7:27200860-27200869
9	YY1	chr7:27200005-27200997	SK-N-SH	brain:	n/a	chr7:27200719-27200727 chr7:27200277-27200291 chr7:27200723-27200732 chr7:27200706-27200728
10	MAZ	chr7:27200450-27201017	GM12878	blood:	n/a	chr7:27200860-27200869
11	RAD21	chr7:27200367-27200987	IMR90	lung:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
12	CHD1	chr7:27199994-27201688	IMR90	lung:	n/a	chr7:27200536-27200546
13	TEAD4	chr7:27200362-27201121	SK-N-SH	brain:	n/a	n/a
14	POLR2A	chr7:27200147-27201779	HUVEC	blood vessel:	n/a	n/a
15	NR2F2	chr7:27200053-27200999	MCF-7	breast:	n/a	n/a
16	RAD21	chr7:27200364-27201052	ECC-1	luminal epithelium:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
17	SPI1	chr7:27200949-27201351	HL-60	blood:	n/a	chr7:27201193-27201206
18	YY1	chr7:27200376-27200986	SK-N-SH	brain:	n/a	chr7:27200719-27200727 chr7:27200723-27200732 chr7:27200706-27200728
19	ELF1	chr7:27200440-27200972	GM12878	blood:	n/a	chr7:27200708-27200720 chr7:27200707-27200716
20	HDAC2	chr7:27200168-27201033	MCF-7	breast:	n/a	n/a
21	PML	chr7:27200416-27201028	GM12878	blood:	n/a	n/a
22	YY1	chr7:27200276-27200980	GM12878	blood:	n/a	chr7:27200719-27200727 chr7:27200277-27200291 chr7:27200723-27200732 chr7:27200706-27200728
23	RAD21	chr7:27200457-27201032	MCF-7	breast:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
24	SUZ12	chr7:27199607-27200986	H1-hESC	embryonic stem cell:	n/a	n/a
25	YY1	chr7:27200223-27200970	HepG2	liver:	n/a	chr7:27200719-27200727 chr7:27200277-27200291 chr7:27200723-27200732 chr7:27200706-27200728
26	CTCF	chr7:27200373-27201068	MCF-7	breast:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771
27	POLR2A	chr7:27200470-27201869	HCT-116	colon:	n/a	n/a
28	CTCF	chr7:27200453-27200984	MCF-7	breast:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771
29	MAX	chr7:27200498-27200987	Hela-S3	cervix:	n/a	chr7:27200860-27200869
30	RAD21	chr7:27200534-27200999	ECC-1	luminal epithelium:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
31	CTCF	chr7:27200521-27201068	K562	blood:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771
32	MYC	chr7:27200464-27201338	NB4	blood:	n/a	chr7:27200860-27200869
33	CTCF	chr7:27200097-27201312	SK-N-SH	brain:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27201186-27201196 chr7:27200754-27200770 chr7:27200753-27200771 chr7:27201119-27201135
34	RAD21	chr7:27200440-27201075	H1-hESC	embryonic stem cell:	n/a	chr7:27200751-27200770 chr7:27200717-27200729 chr7:27200753-27200765 chr7:27200755-27200769
35	TEAD4	chr7:27200427-27200985	MCF-7	breast:	n/a	n/a
36	MAX	chr7:27200142-27200994	MCF-7	breast:	n/a	chr7:27200860-27200869
37	CTCF	chr7:27200201-27201188	HCT-116	colon:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771 chr7:27201119-27201135
38	YY1	chr7:27200179-27201023	ECC-1	luminal epithelium:	n/a	chr7:27200719-27200727 chr7:27200277-27200291 chr7:27200723-27200732 chr7:27200706-27200728
39	MAFK	chr7:27200616-27200976	Hela-S3	cervix:	n/a	n/a
40	CTBP2	chr7:27200303-27200982	H1-hESC	embryonic stem cell:	n/a	n/a
41	BCLAF1	chr7:27200463-27200972	GM12878	blood:	n/a	n/a
42	TEAD4	chr7:27200388-27201041	ECC-1	luminal epithelium:	n/a	n/a
43	FOXM1	chr7:27200412-27200984	GM12878	blood:	n/a	n/a
44	POLR2A	chr7:27199899-27201070	HUVEC	blood vessel:	n/a	n/a
45	CTCF	chr7:27200526-27200984	H1-hESC	embryonic stem cell:	n/a	chr7:27200755-27200768 chr7:27200748-27200769 chr7:27200754-27200770 chr7:27200753-27200771
46	ZNF143	chr7:27200594-27201026	Hela-S3	cervix:	n/a	chr7:27200797-27200807
47	E2F6	chr7:27200215-27201009	A549	lung:	n/a	chr7:27200710-27200722 chr7:27200723-27200732
48	TCF7L2	chr7:27200538-27200987	PANC-1	pancreas:	n/a	n/a
49	EP300	chr7:27200299-27201017	ECC-1	luminal epithelium:	n/a	n/a
50	EGR1	chr7:27200312-27201086	HCT-116	colon:	n/a	chr7:27200333-27200340 chr7:27200705-27200718 chr7:27200706-27200720

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:27200959-27201009	AoSMC	blood vessel:	n/a
2	chr7:27200959-27201009	HIPEpiC	eye:	n/a
3	chr7:27200959-27201009	NHDF-neo	bronchial:	n/a
4	chr7:27200959-27201009	HAEpiC	amniotic membrane:	n/a
5	chr7:27200959-27201009	HRE	kidney:	n/a
6	chr7:27200959-27201009	ECC-1	luminal epithelium:	n/a
7	chr7:27200959-27201009	PFSK-1	brain:	n/a
8	chr7:27200959-27201009	GM06990	blood:	n/a
9	chr7:27200959-27201009	A549	lung:	n/a
10	chr7:27200959-27201009	AG09309	skin:	n/a
11	chr7:27200959-27201009	Hepatocyte	liver:	n/a
12	chr7:27200959-27201009	HPAEpiC	pulmonary alveolar:	n/a
13	chr7:27200959-27201009	HCT-116	colon:	n/a
14	chr7:27200959-27201009	GM12891	blood:	n/a
15	chr7:27200959-27201009	PrEC	prostate:	n/a
16	chr7:27200959-27201009	H1-hESC	embryonic stem cell:	embryo
17	chr7:27200959-27201009	SK-N-SH_RA	brain:	n/a
18	chr7:27200959-27201009	NB4	blood:	n/a
19	chr7:27200959-27201009	SKMC	muscle:	n/a
20	chr7:27200959-27201009	AG04449	skin:	fetal
21	chr7:27200959-27201009	HNPCEpiC	eye:	n/a
22	chr7:27200959-27201009	HCF	heart:	n/a
23	chr7:27200959-27201009	NHBE	bronchial:	n/a
24	chr7:27200959-27201009	HL-60	blood:	n/a
25	chr7:27200959-27201009	HCPEpiC	choroid plexus:	n/a
26	chr7:27200959-27201009	GM19239	blood:	n/a
27	chr7:27200959-27201009	Hela-S3	cervix:	n/a
28	chr7:27200959-27201009	NT2-D1	testis:	n/a
29	chr7:27200959-27201009	U87	brain:	n/a
30	chr7:27200959-27201009	MCF-7	breast:	n/a
31	chr7:27200959-27201009	SAEC	small airway:	n/a
32	chr7:27200959-27201009	MCF10A-Er-Src	breast:	n/a
33	chr7:27200959-27201009	ProgFib	skin:	n/a
34	chr7:27200959-27201009	NH-A	brain:	n/a
35	chr7:27200959-27201009	T-47D	breast:	n/a
36	chr7:27200959-27201009	AG04450	lung:	fetal
37	chr7:27200959-27201009	SK-N-MC	brain:	n/a
38	chr7:27200959-27201009	RPTEC	kidney:	n/a
39	chr7:27200959-27201009	CMK	blood:	n/a
40	chr7:27200959-27201009	HEEpiC	esophagus:	n/a
41	chr7:27200959-27201009	BJ	skin:	n/a
42	chr7:27200959-27201009	LNCaP	prostate:	n/a
43	chr7:27200959-27201009	HEK293	kidney:	embryo
44	chr7:27200959-27201009	BE2_C	brain:	n/a
45	chr7:27200959-27201009	HUVEC	blood vessel:	n/a
46	chr7:27200959-27201009	Caco-2	colon:	n/a
47	chr7:27200959-27201009	K562	blood:	n/a
48	chr7:27200959-27201009	HMEC	breast:	n/a
49	chr7:27200959-27201009	SK-N-SH	brain:	n/a
50	chr7:27200959-27201009	AG10803	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:27200689..27201394-chr7:27213410..27214189,2	NB4	blood:
2	chr7:26721413..26722057-chr7:27200291..27201200,4	MCF-7	breast:
3	chr7:26723322..26725010-chr7:27199019..27201675,2	MCF-7	breast:
4	chr7:26238165..26241346-chr7:27198877..27201770,4	MCF-7	breast:
5	chr7:25932300..25932849-chr7:27200332..27201172,2	K562	blood:
6	chr7:26725689..26726610-chr7:27200641..27201297,2	MCF-7	breast:
7	chr7:26894828..26897181-chr7:27200837..27202990,2	K562	blood:
8	chr7:27190167..27191138-chr7:27200376..27201155,3	MCF-7	breast:
9	chr7:27190086..27191111-chr7:27200198..27201535,13	MCF-7	breast:
10	chr7:26721156..26722065-chr7:27200580..27201256,2	K562	blood:
11	chr7:27200539..27201139-chr7:27219090..27219816,2	MCF-7	breast:
12	chr7:26725724..26726744-chr7:27200278..27201244,5	K562	blood:
13	chr7:26227531..26229073-chr7:27198944..27201412,2	K562	blood:
14	chr7:27190534..27191089-chr7:27200653..27201204,2	K562	blood:
15	chr7:27183139..27183901-chr7:27200335..27201099,3	MCF-7	breast:
16	chr7:26694010..26696341-chr7:27199658..27201244,2	K562	blood:

Variant related genes	Relation type
HOXA7	TF binding region
HOXA7	CpG island
ENSG00000106006	Chromatin interaction
ENSG00000106004	Chromatin interaction
ENSG00000253293	Chromatin interaction
ENSG00000257184	Chromatin interaction
ENSG00000122565	Chromatin interaction
ENSG00000122566	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
11	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
12	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
13	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
14	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
15	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
18	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
19	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
21	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
22	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
23	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
24	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
25	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
26	nsv824042	chr7:27169231-27247232	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
27	nsv887877	chr7:27169388-27217359	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	115 gene(s)	inside rSNPs	diseases
28	nsv887878	chr7:27175295-27214557	Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
29	nsv887879	chr7:27175295-27297791	Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	151 gene(s)	inside rSNPs	diseases
30	esv1798853	chr7:27181568-27309266	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	150 gene(s)	inside rSNPs	diseases
31	nsv531024	chr7:27194426-27461954	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
32	esv1825750	chr7:27200918-27227027	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27186800-27202600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr7:27195400-27203200	Active TSS	Rectal Smooth Muscle	rectum
3	chr7:27196600-27201000	Flanking Active TSS	HUVEC	blood vessel
4	chr7:27197600-27201400	Active TSS	Breast Myoepithelial Primary Cells	Breast
5	chr7:27198400-27201800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
6	chr7:27199400-27201000	Flanking Active TSS	HMEC	breast
7	chr7:27199600-27201000	Bivalent/Poised TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:27199600-27201200	Flanking Active TSS	Adipose Nuclei	Adipose
9	chr7:27199600-27201400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr7:27199600-27201600	Active TSS	Osteobl	bone
11	chr7:27199600-27202600	Active TSS	Fetal Kidney	kidney
12	chr7:27199600-27206400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr7:27199800-27201000	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
14	chr7:27199800-27201000	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
15	chr7:27199800-27201000	Flanking Bivalent TSS/Enh	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr7:27199800-27201000	Enhancers	Lung	lung
17	chr7:27199800-27201200	Flanking Bivalent TSS/Enh	Primary T helper cells fromperipheralblood	blood
18	chr7:27199800-27201200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
19	chr7:27199800-27201200	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
20	chr7:27199800-27201200	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
21	chr7:27199800-27201200	Bivalent Enhancer	Fetal Brain Male	brain
22	chr7:27199800-27201600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr7:27199800-27203400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
24	chr7:27200000-27201000	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
25	chr7:27200000-27201000	Bivalent/Poised TSS	Primary T killer memory cells from peripheral blood	blood
26	chr7:27200000-27201000	Flanking Active TSS	Liver	Liver
27	chr7:27200000-27201000	Flanking Bivalent TSS/Enh	Fetal Thymus	thymus
28	chr7:27200000-27201000	Active TSS	Sigmoid Colon	Sigmoid Colon
29	chr7:27200000-27201000	Bivalent/Poised TSS	Small Intestine	intestine
30	chr7:27200000-27201200	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood
31	chr7:27200000-27201200	Active TSS	Right Atrium	heart
32	chr7:27200000-27201200	Flanking Bivalent TSS/Enh	Thymus	Thymus
33	chr7:27200000-27201200	Active TSS	A549	lung
34	chr7:27200000-27201400	Active TSS	Rectal Mucosa Donor 31	rectum
35	chr7:27200000-27201800	Active TSS	Colonic Mucosa	Colon
36	chr7:27200000-27204400	Active TSS	Colon Smooth Muscle	Colon
37	chr7:27200000-27206000	Active TSS	NHDF-Ad	bronchial
38	chr7:27200200-27201000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
39	chr7:27200200-27201000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
40	chr7:27200200-27201000	Active TSS	Primary T cells from cord blood	blood
41	chr7:27200200-27201000	Flanking Bivalent TSS/Enh	Primary T helper memory cells from peripheral blood 1	blood
42	chr7:27200200-27201000	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
43	chr7:27200200-27201000	Bivalent/Poised TSS	Esophagus	oesophagus
44	chr7:27200200-27201000	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
45	chr7:27200200-27201000	Bivalent Enhancer	Fetal Heart	heart
46	chr7:27200200-27201000	Active TSS	Pancreatic Islets	Pancreatic Islet
47	chr7:27200200-27201000	Flanking Active TSS	Pancreas	Pancrea
48	chr7:27200200-27201000	Flanking Active TSS	Right Ventricle	heart
49	chr7:27200200-27201200	Active TSS	Aorta	Aorta
50	chr7:27200200-27201200	Active TSS	Brain Angular Gyrus	brain

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