Variant report

Variant	rs7832357
Chromosome Location	chr8:126516197-126516198
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126506743..126511658-chr8:126513008..126519867,6	MCF-7	breast:
2	chr8:126510960..126514162-chr8:126514637..126517598,3	MCF-7	breast:
3	chr8:126501580..126503406-chr8:126515565..126518196,2	K562	blood:
4	chr8:126515469..126518186-chr8:126519785..126522159,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIB1-9	chr8:126516125-126516639	expReg_chr8_6600_+

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10956251	0.87[ASN][1000 genomes]
rs12114418	0.87[ASN][1000 genomes]
rs4512391	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4604455	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62523863	0.90[ASN][1000 genomes]
rs6470361	1.00[CHB][hapmap];0.87[JPT][hapmap];0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7012891	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126509400-126518200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr8:126510400-126521200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:126511400-126521400	Weak transcription	Hela-S3	cervix
4	chr8:126511400-126522000	Weak transcription	Fetal Lung	lung
5	chr8:126511600-126516200	Weak transcription	Fetal Kidney	kidney
6	chr8:126511800-126517200	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr8:126511800-126524000	Weak transcription	Brain Hippocampus Middle	brain
8	chr8:126512000-126516200	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr8:126512200-126517800	Weak transcription	Spleen	Spleen
10	chr8:126512200-126518000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr8:126512800-126525000	Weak transcription	Esophagus	oesophagus
12	chr8:126514400-126518000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr8:126514600-126520200	Enhancers	HepG2	liver
14	chr8:126514600-126522000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr8:126514800-126516400	Enhancers	Liver	Liver
16	chr8:126514800-126524200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr8:126515200-126517200	Enhancers	Fetal Muscle Leg	muscle
18	chr8:126515400-126517400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr8:126515600-126516400	Enhancers	Fetal Intestine Small	intestine
20	chr8:126515600-126516600	Enhancers	Fetal Stomach	stomach
21	chr8:126515600-126517200	Enhancers	Left Ventricle	heart
22	chr8:126515600-126517800	Enhancers	Primary hematopoietic stem cells	blood
23	chr8:126515600-126518600	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr8:126515800-126516200	Weak transcription	Psoas Muscle	Psoas
25	chr8:126515800-126516600	Enhancers	Adipose Nuclei	Adipose
26	chr8:126515800-126518200	Enhancers	Skeletal Muscle Female	skeletal muscle
27	chr8:126516000-126516200	Enhancers	Lung	lung
28	chr8:126516000-126516400	Enhancers	Colon Smooth Muscle	Colon
29	chr8:126516000-126516400	Enhancers	Right Ventricle	heart
30	chr8:126516000-126517000	Enhancers	Right Atrium	heart
31	chr8:126516000-126517600	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr8:126516000-126517600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr8:126516000-126518000	Weak transcription	Placenta	Placenta

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