Variant report

Variant rs783418
Chromosome Location chr6:106962679-106962680
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106957000-106962800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr6:106957200-106962800 Flanking Active TSS Primary hematopoietic stem cells blood
3 chr6:106957400-106963400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
4 chr6:106959600-106963400 Active TSS Rectal Mucosa Donor 29 rectum
5 chr6:106959600-106963600 Active TSS NHEK skin
6 chr6:106959800-106962800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:106959800-106963200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr6:106960200-106963200 Active TSS Duodenum Mucosa Duodenum
9 chr6:106960200-106963400 Active TSS Primary T cells fromperipheralblood blood
10 chr6:106960200-106963400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr6:106960400-106963200 Active TSS Placenta Placenta
12 chr6:106960600-106963400 Flanking Active TSS Dnd41 blood
13 chr6:106960800-106962800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr6:106961000-106963400 Active TSS Duodenum Smooth Muscle Duodenum
15 chr6:106961000-106963600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
16 chr6:106961000-106963600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr6:106961000-106963600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:106961000-106964400 Weak transcription Spleen Spleen
19 chr6:106961000-106966800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:106961000-106967800 Weak transcription Esophagus oesophagus
21 chr6:106961000-106981000 Weak transcription Lung lung
22 chr6:106961000-107001400 Weak transcription Gastric stomach
23 chr6:106961200-106963200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
24 chr6:106961200-106963800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:106961200-106968600 Weak transcription Pancreas Pancrea
26 chr6:106961400-106963400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr6:106961400-106967000 Weak transcription K562 blood
28 chr6:106961600-106963400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
29 chr6:106961600-106963800 Weak transcription Fetal Thymus thymus
30 chr6:106961600-106967000 Weak transcription HSMMtube muscle
31 chr6:106961800-106963000 Flanking Active TSS Primary monocytes fromperipheralblood blood
32 chr6:106961800-106963600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
33 chr6:106962000-106963200 Flanking Active TSS Primary B cells from cord blood blood
34 chr6:106962000-106963200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr6:106962000-106963400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
36 chr6:106962000-106966600 Weak transcription Osteobl bone
37 chr6:106962000-106972800 Weak transcription Colon Smooth Muscle Colon
38 chr6:106962200-106963000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
39 chr6:106962200-106963400 Enhancers Primary mononuclear cells fromperipheralblood Blood
40 chr6:106962200-106963400 Enhancers Hela-S3 cervix
41 chr6:106962200-106963400 Active TSS HMEC breast
42 chr6:106962200-106963800 Enhancers Fetal Intestine Small intestine
43 chr6:106962200-106964400 Weak transcription Small Intestine intestine
44 chr6:106962200-106966600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr6:106962200-106966800 Weak transcription HSMM muscle
46 chr6:106962200-106967000 Weak transcription H9 Cell Line embryonic stem cell
47 chr6:106962200-106967000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr6:106962200-106967000 Weak transcription Fetal Intestine Large intestine
49 chr6:106962400-106962800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr6:106962400-106962800 Genic enhancers Primary B cells from peripheral blood blood

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