Variant report

Variant rs78342713
Chromosome Location chr5:61601101-61601102
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61596200-61601200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:61600400-61601200 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr5:61600600-61601200 Enhancers Primary T cells fromperipheralblood blood
4 chr5:61600800-61601200 Enhancers H1 Cell Line embryonic stem cell
5 chr5:61600800-61601200 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr5:61600800-61601200 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr5:61600800-61601200 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr5:61600800-61601200 Enhancers Primary T regulatory cells fromperipheralblood blood
9 chr5:61600800-61601200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr5:61600800-61601200 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr5:61600800-61601200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:61600800-61601800 Flanking Active TSS Dnd41 blood
13 chr5:61601000-61601200 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr5:61601000-61601200 Enhancers HUES48 Cell Line embryonic stem cell
15 chr5:61601000-61601200 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr5:61601000-61601200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr5:61601000-61601200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr5:61601000-61601200 Enhancers Primary monocytes fromperipheralblood blood
19 chr5:61601000-61601200 Active TSS Primary neutrophils fromperipheralblood blood
20 chr5:61601000-61601200 Enhancers Primary B cells from cord blood blood
21 chr5:61601000-61601200 Enhancers Primary B cells from peripheral blood blood
22 chr5:61601000-61601200 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr5:61601000-61601200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr5:61601000-61601200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr5:61601000-61601200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:61601000-61601200 Enhancers Adipose Nuclei Adipose
27 chr5:61601000-61601200 Enhancers Liver Liver
28 chr5:61601000-61601200 Enhancers Brain Angular Gyrus brain
29 chr5:61601000-61601200 Enhancers Brain Anterior Caudate brain
30 chr5:61601000-61601200 Enhancers Brain Cingulate Gyrus brain
31 chr5:61601000-61601200 Enhancers Brain Germinal Matrix brain
32 chr5:61601000-61601200 Enhancers Brain Inferior Temporal Lobe brain
33 chr5:61601000-61601200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr5:61601000-61601200 Enhancers Brain Substantia Nigra brain
35 chr5:61601000-61601200 Enhancers Colon Smooth Muscle Colon
36 chr5:61601000-61601200 Enhancers Duodenum Mucosa Duodenum
37 chr5:61601000-61601200 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr5:61601000-61601200 Active TSS Fetal Brain Female brain
39 chr5:61601000-61601200 Enhancers Fetal Intestine Large intestine
40 chr5:61601000-61601200 Enhancers Fetal Intestine Small intestine
41 chr5:61601000-61601200 Enhancers Fetal Lung lung
42 chr5:61601000-61601200 Enhancers Fetal Stomach stomach
43 chr5:61601000-61601200 Enhancers Pancreas Pancrea
44 chr5:61601000-61601200 Enhancers Psoas Muscle Psoas
45 chr5:61601000-61601200 Enhancers Rectal Mucosa Donor 31 rectum
46 chr5:61601000-61601200 Enhancers Rectal Smooth Muscle rectum
47 chr5:61601000-61601200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr5:61601000-61601200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr5:61601000-61601200 Enhancers Stomach Smooth Muscle stomach
50 chr5:61601000-61601200 Enhancers Thymus Thymus

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