Variant report

Variant	rs78343907
Chromosome Location	chr3:133015484-133015485
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1004358	chr3:133014772-133025177	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv2760760	chr3:133014772-133025189	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1006173	chr3:133015093-133025177	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv4016	chr3:133015463-133032477	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133010400-133016600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr3:133012400-133015600	Enhancers	NH-A	brain
3	chr3:133013600-133016400	Enhancers	Fetal Lung	lung
4	chr3:133014000-133015600	Enhancers	Left Ventricle	heart
5	chr3:133014000-133015600	Enhancers	Right Atrium	heart
6	chr3:133014000-133015800	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr3:133014000-133016000	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr3:133014000-133016200	Enhancers	HSMMtube	muscle
9	chr3:133014000-133017000	Enhancers	Ovary	ovary
10	chr3:133014200-133016600	Enhancers	Brain Germinal Matrix	brain
11	chr3:133014200-133016600	Enhancers	Fetal Muscle Leg	muscle
12	chr3:133014400-133015600	Enhancers	Adipose Nuclei	Adipose
13	chr3:133014400-133017000	Enhancers	Fetal Brain Male	brain
14	chr3:133014600-133015600	Weak transcription	HMEC	breast
15	chr3:133014600-133019000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr3:133014800-133015800	Enhancers	Muscle Satellite Cultured Cells	--
17	chr3:133014800-133016400	Enhancers	Fetal Heart	heart
18	chr3:133014800-133019800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr3:133014800-133019800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr3:133014800-133020800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr3:133015000-133019800	Weak transcription	HSMM	muscle
22	chr3:133015200-133015600	Enhancers	Fetal Stomach	stomach
23	chr3:133015200-133015800	Enhancers	Rectal Smooth Muscle	rectum
24	chr3:133015200-133016000	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr3:133015400-133015600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr3:133015400-133015600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr3:133015400-133015600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr3:133015400-133015800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr3:133015400-133015800	Enhancers	Pancreatic Islets	Pancreatic Islet
30	chr3:133015400-133015800	Enhancers	Psoas Muscle	Psoas
31	chr3:133015400-133016200	Enhancers	Right Ventricle	heart
32	chr3:133015400-133016600	Enhancers	Fetal Brain Female	brain
33	chr3:133015400-133016800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr3:133015400-133019000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr3:133015400-133019400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr3:133015400-133019400	Weak transcription	HUVEC	blood vessel
37	chr3:133015400-133019600	Weak transcription	Osteobl	bone

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