Variant report

Variant	rs78344523
Chromosome Location	chr15:60209954-60209955
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:60209756..60210383-chr15:60618737..60619952,3	K562	blood:
2	chr15:60209402..60209959-chr15:60419488..60420024,3	MCF-7	breast:
3	chr15:60209749..60210266-chr15:60618767..60619600,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904280	chr15:60042722-60524025	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv2760398	chr15:60208658-60243534	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1553	chr15:60209361-60234943	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60209600-60210200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr15:60209600-60210200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chr15:60209600-60210200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
4	chr15:60209600-60210400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr15:60209600-60210400	Enhancers	H1 Cell Line	embryonic stem cell
6	chr15:60209600-60210400	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr15:60209600-60210400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr15:60209600-60210600	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr15:60209600-60210600	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr15:60209600-60210600	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr15:60209600-60211400	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr15:60209600-60212600	Enhancers	Dnd41	blood
13	chr15:60209800-60210000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr15:60209800-60210000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr15:60209800-60210000	Bivalent Enhancer	Brain Substantia Nigra	brain
16	chr15:60209800-60210200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
17	chr15:60209800-60210200	Enhancers	Primary T helper cells fromperipheralblood	blood
18	chr15:60209800-60210400	Enhancers	Primary T cells fromperipheralblood	blood
19	chr15:60209800-60210400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr15:60209800-60212800	Enhancers	Primary T helper cells PMA-I stimulated	--

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