Variant report

Variant rs78360405
Chromosome Location chr5:111519493-111519494
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111497600-111538600 Weak transcription Small Intestine intestine
2 chr5:111501400-111546400 Weak transcription Spleen Spleen
3 chr5:111502400-111546400 Weak transcription Aorta Aorta
4 chr5:111502800-111546000 Weak transcription Ovary ovary
5 chr5:111503600-111527800 Weak transcription Psoas Muscle Psoas
6 chr5:111503600-111537400 Weak transcription Lung lung
7 chr5:111504800-111541400 Weak transcription Right Ventricle heart
8 chr5:111504800-111557800 Weak transcription Placenta Amnion Placenta Amnion
9 chr5:111504800-111586400 Weak transcription Gastric stomach
10 chr5:111505000-111521000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr5:111505000-111537400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr5:111505600-111521000 Weak transcription Placenta Placenta
13 chr5:111505600-111541800 Weak transcription Fetal Muscle Leg muscle
14 chr5:111510800-111520600 Weak transcription Brain Cingulate Gyrus brain
15 chr5:111510800-111540000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr5:111510800-111547400 Weak transcription HUVEC blood vessel
17 chr5:111511000-111520400 Weak transcription Liver Liver
18 chr5:111518400-111520600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:111518600-111519600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:111518600-111519600 Enhancers A549 lung
21 chr5:111518800-111519600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:111518800-111519600 Enhancers HUES64 Cell Line embryonic stem cell
23 chr5:111518800-111519600 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr5:111518800-111519600 Strong transcription Adipose Nuclei Adipose
25 chr5:111518800-111519600 Enhancers Brain Anterior Caudate brain
26 chr5:111518800-111519600 Enhancers NH-A brain
27 chr5:111518800-111519800 Enhancers Esophagus oesophagus
28 chr5:111518800-111519800 Enhancers HMEC breast
29 chr5:111518800-111520600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr5:111519000-111519600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr5:111519000-111519600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:111519000-111519600 Enhancers Fetal Brain Female brain
33 chr5:111519000-111546400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr5:111519200-111519800 Enhancers NHEK skin
35 chr5:111519200-111532600 Weak transcription Fetal Kidney kidney
36 chr5:111519200-111537400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:111519200-111553800 Weak transcription Pancreas Pancrea
38 chr5:111519400-111520400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr5:111519400-111522000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr5:111519400-111524800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr5:111519400-111529200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr5:111519400-111530600 Weak transcription Left Ventricle heart
43 chr5:111519400-111531800 Weak transcription Fetal Heart heart

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