Variant report

Variant rs78455538
Chromosome Location chr3:75834926-75834927
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:75833600-75835000 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr3:75833600-75835000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
3 chr3:75833600-75835000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
4 chr3:75833600-75835000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr3:75833600-75835000 Active TSS Primary hematopoietic stem cells short term culture blood
6 chr3:75833600-75835000 Active TSS Primary T helper 17 cells PMA-I stimulated --
7 chr3:75833600-75835000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr3:75833600-75835000 Active TSS Brain Cingulate Gyrus brain
9 chr3:75833600-75835000 ZNF genes & repeats Fetal Brain Male brain
10 chr3:75833600-75835000 Active TSS Rectal Mucosa Donor 29 rectum
11 chr3:75833600-75835000 Active TSS Rectal Mucosa Donor 31 rectum
12 chr3:75833600-75835000 Active TSS Skeletal Muscle Male skeletal muscle
13 chr3:75833600-75835000 Active TSS HSMM muscle
14 chr3:75833600-75835000 Active TSS HSMMtube muscle
15 chr3:75833600-75835200 Active TSS Stomach Smooth Muscle stomach
16 chr3:75833600-75835200 Active TSS A549 lung
17 chr3:75833800-75835000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
18 chr3:75833800-75835000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:75833800-75835000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:75833800-75835000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:75833800-75835000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
22 chr3:75833800-75835000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:75833800-75835000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
24 chr3:75833800-75835000 Active TSS Duodenum Smooth Muscle Duodenum
25 chr3:75833800-75835000 Active TSS Fetal Intestine Large intestine
26 chr3:75833800-75835000 Active TSS Pancreatic Islets Pancreatic Islet
27 chr3:75833800-75835000 Active TSS Fetal Lung lung
28 chr3:75833800-75835000 Active TSS Fetal Muscle Trunk muscle
29 chr3:75833800-75835000 Active TSS Left Ventricle heart
30 chr3:75833800-75835000 Active TSS Pancreas Pancrea
31 chr3:75833800-75835000 Active TSS Psoas Muscle Psoas
32 chr3:75833800-75835000 Active TSS Right Ventricle heart
33 chr3:75833800-75835000 Active TSS K562 blood
34 chr3:75833800-75835000 Active TSS NHDF-Ad bronchial
35 chr3:75833800-75835000 Active TSS Osteobl bone
36 chr3:75834000-75835000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:75834000-75835000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr3:75834000-75835000 Active TSS Primary T cells from cord blood blood
39 chr3:75834000-75835000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
40 chr3:75834000-75835000 Active TSS Primary T helper naive cells from peripheral blood blood
41 chr3:75834000-75835000 Active TSS Primary T killer naive cells fromperipheralblood blood
42 chr3:75834000-75835000 Active TSS Cortex derived primary cultured neurospheres brain
43 chr3:75834000-75835000 Active TSS Brain Angular Gyrus brain
44 chr3:75834000-75835000 Active TSS Brain Anterior Caudate brain
45 chr3:75834000-75835000 Active TSS Brain Germinal Matrix brain
46 chr3:75834000-75835000 Active TSS Brain Hippocampus Middle brain
47 chr3:75834000-75835000 Active TSS Brain Inferior Temporal Lobe brain
48 chr3:75834000-75835000 Active TSS Colon Smooth Muscle Colon
49 chr3:75834000-75835000 Active TSS Fetal Adrenal Gland Adrenal Gland
50 chr3:75834000-75835200 Active TSS HUES48 Cell Line embryonic stem cell

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