Variant report

Variant	rs78457031
Chromosome Location	chr4:54648224-54648225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879015	chr4:54596466-54665559	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv879016	chr4:54638218-54710952	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3379351	chr4:54646995-54650493	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54644800-54652800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr4:54646400-54650000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:54646600-54649200	Enhancers	Osteobl	bone
4	chr4:54646600-54650200	Enhancers	NHDF-Ad	bronchial
5	chr4:54646800-54649200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr4:54646800-54649600	Enhancers	Muscle Satellite Cultured Cells	--
7	chr4:54647000-54648400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr4:54647000-54648800	Enhancers	Pancreatic Islets	Pancreatic Islet
9	chr4:54647000-54649400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:54647200-54649200	Enhancers	HepG2	liver
11	chr4:54647400-54649200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr4:54647600-54648400	Enhancers	HUVEC	blood vessel
13	chr4:54647600-54648800	Enhancers	Fetal Lung	lung
14	chr4:54648000-54648400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr4:54648000-54648400	Flanking Active TSS	Liver	Liver
16	chr4:54648000-54648400	Enhancers	Stomach Smooth Muscle	stomach
17	chr4:54648000-54648400	Enhancers	Hela-S3	cervix
18	chr4:54648000-54648600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr4:54648000-54648600	Enhancers	Primary hematopoietic stem cells	blood
20	chr4:54648000-54648800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr4:54648000-54648800	Enhancers	NH-A	brain
22	chr4:54648000-54649200	Enhancers	Fetal Stomach	stomach
23	chr4:54648200-54648400	Enhancers	NHLF	lung
24	chr4:54648200-54648600	Flanking Active TSS	A549	lung

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